Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272086g00011 ATGGAGATGGAGTTAATATGCAAAGAAAGCATGAAACCAAGTTCAGCAACTCCTCCACACCTCAAAACTTATCCCCTCTCCTTCGTCGATGTGATAACTCCTCCCCAATACATGCCAATGCTTTACTTTTACAATACAATACAAATTGAAAACCAAGAATCAAAGTTAGCCCTGCTCAAGGAATCCTTACAGGAAACTCTCTCAGCGTACTACCCAATTGCAGGCAGGTTCAAAGGACGACTCTCCGTTGACTGCAACGACGAAGGAGCGCCATTGCTCATCACAAAACTCAAATGCCATCTCTCAAACTTTCTCAAAAACCCAATCACACCAAACCTTCTTCCTCTCTTCCCGGACAATCTTGCATGGAGCGATATGAACAATCCAGAGCATGATCCCATCATGGCCATTCAAATCAACTGCTTTCAATGTGGCGGAATCGCAATCGCAGTCTGCCTCTCCCACAAGTTCGGCGACATGTCCACTCTCTTCAACTTCTTCAACCACTGGGCCACCATTACCAGCCACCACCAAGATCGGAACAAGCCACTACCTTCTCCGCCCTTACTCTACGCCGGAGTTTCGGTTTTTCCTCAAGGAAACCTTCCTGTTTCCGGCGAAAGGCCCTACTACGCTCTCCCGAAATGGGTTTGCAAGAGGTTCGTGTTCGAAGCTTCCAAGATCGAAGCCCTAAAAGCCATGGCCGGACCAATTCATCCAACAAGGTTTCAAGCGGTGGCAGCCCTGATTCATAAGTGTGCGGTTTCTACACTAAGCCCTAACTCCCCGTTGTTAACCTCCATTGCCGTGAATCTTCGGAAGAGGATTGATCCTCCTGTTCCTAGCAACACCTTAGGAAACATGGTTTCGTCCCTCATATTTATGATCTCTGAGAAGGATGAGCTAGCGGAGTTGGTAAGCAAGATGAAAGAGGGGATGATTCGAAGTGAGACGGAGTGGAAGAAGCATGGAGGAAAGTACAGGGACTTGGATTTCATAGCTGACAAACTGAAACGAATGGCCGAGGCTCCATCGCTGGAGGCTTTGAAGATTCCGCTGATGATAGTGACTAGTTGGTGCGGGTTTTCAATGTACGAGGCGGATTTTGGATGGGGGAAACCGGCGTGGATAGCGTCCTTTACGAATGGGCATAACACTCTGGTTTTTATGGATGCAAGAGATGGAAAAGGGATGGAAGTGATTGTGACCATGGAAGAGGAACACATGGAAAGGTTTGAGTGCAACCCGGAACTGCTTCAATATGCCTCTCTTGACCCATCCATTCAACTCTGA 1293 0.4772 MEMELICKESMKPSSATPPHLKTYPLSFVDVITPPQYMPMLYFYNTIQIENQESKLALLKESLQETLSAYYPIAGRFKGRLSVDCNDEGAPLLITKLKCHLSNFLKNPITPNLLPLFPDNLAWSDMNNPEHDPIMAIQINCFQCGGIAIAVCLSHKFGDMSTLFNFFNHWATITSHHQDRNKPLPSPPLLYAGVSVFPQGNLPVSGERPYYALPKWVCKRFVFEASKIEALKAMAGPIHPTRFQAVAALIHKCAVSTLSPNSPLLTSIAVNLRKRIDPPVPSNTLGNMVSSLIFMISEKDELAELVSKMKEGMIRSETEWKKHGGKYRDLDFIADKLKRMAEAPSLEALKIPLMIVTSWCGFSMYEADFGWGKPAWIASFTNGHNTLVFMDARDGKGMEVIVTMEEEHMERFECNPELLQYASLDPSIQL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272086g00011 430 Pfam Transferase family 2 418 - -
Stsc272086g00011 430 Gene3D - 1 202 IPR023213 -
Stsc272086g00011 430 Gene3D - 214 420 IPR023213 -
Stsc272086g00011 430 Coils Coil 49 69 - -
Stsc272086g00011 430 PANTHER F21J9.9 4 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272086g00011 Stsc-Chr272086 67538 68830 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272086g00011 1 413 Monolignol Biosynthesis Gene Families AT5G48930 22.799 1.74e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272086g00011 - - adu:107481923 663.299