Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272075g00009 ATGGAATTGGAAGCGGATCACCATCATCATCATCATCACCAACATCAAAACGGAATCCGAACCAGACCTAATTTCCCTCTTCAGCTCTTAGAGAAAACTAAAGAAGTTGAAGACGCCGTTGCTGAACAGCCGTGCTCCACCGCCGTCGAAGAAGCCAGTGACGGAGGTGGAGCAACTGTCAGCAACAGCGCCCTCAGTTTACAGGACCAGCAGCAACAGAACAGCACTAAGAAGCCGCCGCCCAAGCGGACCTCCACCAAGGACCGCCACACCAAGGTGGACGGCCGCGGTCGCCGGATCCGCATGCCGGCGGCCTGCGCCGCCCGCGTGTTCCAGCTGACGAGGGAGTTAGGGCACAAATCCGACGGCGAGACGATCGAGTGGCTGCTACAGCAAGCGGAGCCGGCGGTGATCGCCGCAACCGGAACCGGCACCATCCCTGCCAACTTCACCTCGCTCAATATCTCGCTCCGAAGCTCCGGTTCCACCTTGTCGGCACCGTCACACTACTTCAGAGGAAGCTACTTCAACCCTAGCACGTTTTCCTCGGCCGCCGTAGCGGCCGCTGTCGGTGGCGGAAGGAGCCGCAGCGGAGCGGGTGATAATTGGGAGCGTAGCATGAACATGAACATGAACATGAATATGAATATGAATATGAATATGAACATGGCAGCTATTGAAGATTCTAGAAGGATGTTGTTTCCCGGTTCATCGGAGAATTGTTCAAATTCCATGGGATTGAACTTCAACCCTAGCAACGTGAATGCCGTTCTCCAAACGAAGCAAGAGCTACGTGAAGACAGCGCCGCCGCATCCGGCGGCGGAGGTGGCGGAAATCTTGATTTGGTTGGCGGTGATTGCGACGGAAGCATAGGGAGAAAGAGAAGAGTGGAGCAAGAGGTATCGGTTTCCCATCAGGTAGGAAACTACTTGCTACAATCAAGTACCGCGGGTTCGATCCCGGCGAGCCACGCCTCGAATCCGGCAACGTTTTGGATGGTGGCTGGCCACCAAAGCATGAACGGTGGTGGTGGTGGTGGCGGTGGCAGTGGTAGTAATGATCAAATTTGGGCAATTCCGTCTATGGCGAATTCCGTCTATAGAGGGGGTATGCCAAGCGGTGTTGGTGGGATTCATTTCATGAATTTTGCTTCGCCAATGTCTCTTATGCCTTCTGCCATGGTCGGTGGCGGCGGTGGCGGTGGTGCAATGCTGAATGAAAGCAATAATTTAGGTATGCTTGCAGCTCTAAATGCCTACAGGCAGATTCCGGCCAATGGCAGCGGCGTTTCGGAGTCTCCGGCAAGCACCGGGCACCACCAACATCATGGTGGAGATGATGGGCCTGAGACAACAAGTCAACAACAACAACATTCTTGA 1380 0.5471 MELEADHHHHHHHQHQNGIRTRPNFPLQLLEKTKEVEDAVAEQPCSTAVEEASDGGGATVSNSALSLQDQQQQNSTKKPPPKRTSTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTLSAPSHYFRGSYFNPSTFSSAAVAAAVGGGRSRSGAGDNWERSMNMNMNMNMNMNMNMNMAAIEDSRRMLFPGSSENCSNSMGLNFNPSNVNAVLQTKQELREDSAAASGGGGGGNLDLVGGDCDGSIGRKRRVEQEVSVSHQVGNYLLQSSTAGSIPASHASNPATFWMVAGHQSMNGGGGGGGGSGSNDQIWAIPSMANSVYRGGMPSGVGGIHFMNFASPMSLMPSAMVGGGGGGGAMLNESNNLGMLAALNAYRQIPANGSGVSESPASTGHHQHHGGDDGPETTSQQQQHS 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272075g00009 459 Pfam TCP family transcription factor 84 201 IPR017887 -
Stsc272075g00009 459 MobiDBLite consensus disorder prediction 56 80 - -
Stsc272075g00009 459 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 40 456 IPR005333 GO:0003700
Stsc272075g00009 459 MobiDBLite consensus disorder prediction 425 459 - -
Stsc272075g00009 459 MobiDBLite consensus disorder prediction 1 23 - -
Stsc272075g00009 459 ProSiteProfiles TCP domain profile. 86 140 IPR017887 -
Stsc272075g00009 459 MobiDBLite consensus disorder prediction 35 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272075g00009 Stsc-Chr272075 69530 70909 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272075g00009 59 390 TCP Transcription Factor Family AT3G47620 43.288 2.25e-56 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc272075g00009 TCP 9.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272075g00009 - - adu:107489244 692.96