Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272071g00001 ATGGAACATTTATGTGGTGCTAAGTTTGGGAAGGTGATTAATAAGGCAAGGCCTTATTTGCTAACTGTAGGATTGCAATTTGGGATGGCAGGGACATACCTCTTCACCATGGCTAGCCTTAACCATGGAATGAATCGTTTGGTGTTTATTGTATATCGTAATGCCATCGCTGCTTTGTCCCTGGCTCCTTTTGCATTGATTTTTGAAAGGAAAGTGAGGCCAAAGATGACAATCTCTGTATTCTTTCAGATAGTTGTTCTTGGATTTCTAGAGCCGGTGATTGATCAAGGTTTCACTTTCTTGGGGATGCAATACACTTCGGCTTCATTTGCATCAGCTGTTATGAACGCTGTGCCCTCTGTCACCTTTGTGCTTGCAGTCCTTCTCAGGATGGAGCGCATAAAAATAAAGGAGATAAGGAGTCAAGCAAAAGTGGTTGGAACATTAGTGACATTTGGAGGGGCAATGCTGATGACACTTTATAAAGGCCCTGCATTCAACTTGTTTCATTCATCAAACACAATCCATCAGAATGCTCAGACCCACTCTCTTGATAATCACAAAAACTGGATCACCGGCACACTTTTCATATTCCTTGGTTGTGTCGCTTGGTCTTGTTTCTACATTTTGCAGTCGATAACGGTGAGAAGATATCCAGCAGAACTATCACTATCATCATTGATATGCTTGGCGGGTACTTTTGAAAGTGCAGTGGTTGCTCTCATTTCAGATCGTCGCCCTCAAGCATGGGCAATTGGCTTCAACTACTCCCTCTATGGTCCTCTCTACACTGGAATAGTGAGTTCAGGAATAGCATATTATATACAAGCGTTAGTAATGCAAAGCAGAGGACCAGTGTTTGTAACATCTTTTAATCCACTCTGCATGATCATTGTTGCTGCTTTGGGCTCCTTACTACTAGGAGAACAGCTCCACCTTGGAAG 944 0.4269 MEHLCGAKFGKVINKARPYLLTVGLQFGMAGTYLFTMASLNHGMNRLVFIVYRNAIAALSLAPFALIFERKVRPKMTISVFFQIVVLGFLEPVIDQGFTFLGMQYTSASFASAVMNAVPSVTFVLAVLLRMERIKIKEIRSQAKVVGTLVTFGGAMLMTLYKGPAFNLFHSSNTIHQNAQTHSLDNHKNWITGTLFIFLGCVAWSCFYILQSITVRRYPAELSLSSLICLAGTFESAVVALISDRRPQAWAIGFNYSLYGPLYTGIVSSGIAYYIQALVMQSRGPVFVTSFNPLCMIIVAALGSLLLGEQLHLG 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272071g00001 314 PANTHER WAT1-RELATED PROTEIN 18 313 IPR030184 GO:0016020|GO:0022857
Stsc272071g00001 314 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 313 - -
Stsc272071g00001 314 Pfam EamA-like transporter family 192 313 IPR000620 GO:0016020
Stsc272071g00001 314 Pfam EamA-like transporter family 30 159 IPR000620 GO:0016020
Stsc272071g00001 314 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272071g00001 Stsc-Chr272071 17 3378 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272071g00001 13 264 Nodulin-like Gene Family AT4G08290 60.870 1.41e-115 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272071g00001 - - gmx:100777641 506.138