Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272069g00007 ATGTCGTCTCACCAAGCCACCACCGACTCCGAGCTCGTCTGCGTCACCGGTGCAAACGGCTTCATCGGTTCATGGCTAGTCCACACCCTCCTCCACCACCACCCACGCTACACCGTCCACGCCACCGTCTTCCCCGGTTCCGATTACTCCCACCTCCTCACCCTCCACCCTGACGCCCATTCCCGCATCAAAATCTTCCCCGCCGACATCCTCGACGCCGCAGCCATATCCACCGCAATCTCCGGCTGCTCCGGCGTATTCCACGTCGCCTCCCCCTGCACTCTCGACGACCCCACCGACCCGGAGAATTCCCTCCTTCGCCCTGCCGTCCAAGGAACCCTAAACGTACTCGAAGCCGCGAAGCGAACCCAGGCGCGGCGCGTGGTTCTCACGTCCTCAATATCCGCCATGGTTCCGAACCCTAATTGGCCTCCAAACAAACCTTTCGACGAGGATTCCTGGACGGACGTCGAATTCTGCAAGAACTGGGGCAAGTGGTACCCGGTGTCGAAGACAGCGGCGGAGAAGGCGGCGTGGAAGTTCGTGGAACAGCACGGCGGCGCTGAGGTGGTGGCAGTGCTTCCGTCAACGTGTCTTGGTCAATTGCTGCAGAAGGAGCTGAATGCAAGCTCGGCGGTTCTGCAGAAAGTGATGAGAGGGTCTAGGGACACGCAGGAGCATCACTGGTTGGGTGCAGTGCACGTGAGGGACGTTGCTAGGGCTCAGGTTTTGATCTATGAGACTCCCTCTGCTGCTGCTAGATACTTGTGTACCAATGGCATATACCAATTCTCTAGCTTTGCAAAGATTCTCTCTGAGTTGTACCCTGATTTTCCTATCTACAGGTTCCCTGAAGAAACTCAACCTGGCTTGACACCATGTAAAGATGCAGCAAAGAGGCTAACAGATTTGGGTTTTGTGTTCACCCCAGTTGAAGATGCTGTTCAAGAAGCAGTGGAGAGCCTCATAGATAAAGGTTTCTTGCAGAGAATACCCTCACATAATTAG 1008 0.5585 MSSHQATTDSELVCVTGANGFIGSWLVHTLLHHHPRYTVHATVFPGSDYSHLLTLHPDAHSRIKIFPADILDAAAISTAISGCSGVFHVASPCTLDDPTDPENSLLRPAVQGTLNVLEAAKRTQARRVVLTSSISAMVPNPNWPPNKPFDEDSWTDVEFCKNWGKWYPVSKTAAEKAAWKFVEQHGGAEVVAVLPSTCLGQLLQKELNASSAVLQKVMRGSRDTQEHHWLGAVHVRDVARAQVLIYETPSAAARYLCTNGIYQFSSFAKILSELYPDFPIYRFPEETQPGLTPCKDAAKRLTDLGFVFTPVEDAVQEAVESLIDKGFLQRIPSHN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272069g00007 335 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 11 319 - -
Stsc272069g00007 335 Pfam NAD dependent epimerase/dehydratase family 13 251 IPR001509 -
Stsc272069g00007 335 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 322 IPR036291 -
Stsc272069g00007 335 Gene3D - 2 335 - -
Stsc272069g00007 335 FunFam Cinnamoyl-CoA reductase 1 6 335 - -
Stsc272069g00007 335 CDD FR_SDR_e 13 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272069g00007 Stsc-Chr272069 41727 43797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272069g00007 11 328 Monolignol Biosynthesis Gene Families AT2G02400 64.890 8.52e-156 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272069g00007 - - gmx:100795399 498.434