Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc272069g00003 | ATGGATAAAAGAGTTCTAATATTCCTACTACTCATTTTCAGTTCTTTGTTAGCCGTCGCAGCAAGAACAGCAAATCAAGACTACCAAACTCTGCTGGCTCTAAAGAACGAGTGGCAGAACACACCACCTGATTGGGATCGCTCGAATGATCCTTGTGGAGATCGTTGGGTTGGCATTGGGTGCATCAACGGAGCGGTTACCTCCATAACATTGGCAAGCATGAATTTGAGAGGCCAGCTTTCATCAGAAATTGGAAGACTATCTGAATTGCGAATTCTGGATCTCTCCTACAATAAGAATTTAACAGGACCACTTCCCATAGCAATTGGAAACTTGAGAAAGCTGACAAACTTAATTCTTGCTGACTGTGGTTTCAGTGGTGTTATACCAGATACAATTGGAAATCTGCAACGACTTGCATTCTTGTCTTTAAATTCAAATAACTTCAACGGGCAAATTCCAGCCACTATTGGCAATCTCACAAATTTATCATGGCTGGACTTGGCTGAAAACCAGCTTGAAGGGCCTATCCCAATATCAAATGGAACCTCTCCTGGTCTTGATATGCTACACCATACAAAGCACTTTCATTTTGGGGCTAACGAACTTTCAGGCAATATTCCTCCTCAGCTTTTTAGCTCAGACATGTCTCTGATACATGTGCTTTTTGAAGGTAACAAATTTACTGGTAATGTTCCATCTACACTTGGACTAGTCCAGAGTCTCGAGGTTCTGCGCCTTGATGGTAATTTTCTAAGTGGATTGGTGCCTGCGAATATTAGCAACCTTAAAAATCTTAGGGATTTGCTCCTCTCCAACAATCGCCTATCTGGTCCCCTTCCCAACCTTTCTGGAATGAACATCCTCAACTTCCTGGATGTGAGCAATAATAGTTTTGATCCATCAGAGTTTCCACTATGGTTGACAAACCTATCATCTTTGACAACACTTGCTATGGAGAATATACAACTTCAAGGGAATATTCCTGTTTCATTTTTCAGTTTGAGTCAGTTACAGACAGTGAATCTGAAAGACAACCAGCTAAATGGAACATTAGATATTGGCACTACCATCAGCAACCAACTGGAAATCGTTGATTTGCAGACCAACTATATTGATAAGTTTAATCCCGAAATTAATGTATCGAAAGTGGAAATAAGACTTGTCGATAATCCGGTTTGTGGAGGAGGAGCTTTACAGGATTATTGTTCCATTCCACAACAAAACAACCTTTATACAACACCACTGAACAATTGTGTACCTGTTACCTGCAGCACAGATCAGAAACAAAGCCCTAACTGCAAATGTGCATATCCATATACAGGAACTCTAACTTTCAGGGCACCAAGCTTCTCTGACTTGCAAAACCAGTCAGTCTTTGCATTGCTGGAGTCATCTATGATGCGGACTTTTCATCAAAATAATCTACCTGTGGACACAGTTTCTGTGAGCAATCCAAGAAAGGTAGAATTGTACCTTGATTTGAGTCTAGAAGTGTTTCCATCTGGCCAAGATCGTTTCAACCGAACAGGGATTATCAATATAGGCTTTGTGCTTAGCAACCAGTCATATAAGCCTCCTGCACCTTTTGGACCATTTATTTTTCTTGCTGATAATTATGAAAACTATATGGATGACTCAGTATTAATCAGCTCTGGAGGATCCAAGAAATCTTCAAATACTGGAATAATAGCCGGAGTTGCTGGGGGTATTGTCCTGGTGATATTATTAATCATTGCAGGTGTTTATGTCTTGTACCAAAAGAATAAGGCGAAAAGAGCAAAAGAGAAAAACAATCCTTTTGCAAAATGGGAAGAAGATGCGAGCAATACTAGTATTCCGCAGCTAAAAGGAGCAAGGCACTTCACTTTTGAAGAAATTCAGAACTACACCAAAAACTTCTCACAAGCCAATGGTATTGGATCTGGAGGATATGGGAAGGTTTATCGAGGTACTCTTCAAAATGGGCAACTTATTGCTGTTAAAAGGGCTCAGAAGGAATCAATGCAGGGAGGGCTGGAATTCAAGACTGAGATTGAAATGCTATCAAGGGTCCACCATAAGAATCTTGTTAGCCTTATAGGTTTCTGCTTTGAGCAAGGAGAACAAATGCTAATTTATGAATATGTTCCTAATGGCACTTTGAAGGATACTCTTTCAGGTAAATCAGGAATAAGATTGGATTGGATTAGAAGGCTAAAAATTGCACTTGGTGCTGCCAGGGGGCTGGATTATCTCCATGAACATGCCGATCCTCCTATCGTACATAGGGACATCAAATCCACAAACATATTATTGGATGAACGCTTGAATGCAAAAGTTTCTGATTTTGGACTCTCCAAACCATTGGGAGATGGCGAAAAAGGCTACGTTACCACTCAAGTCAAAGGGACAATGGGCTACTTGGACCCGGAGTACTATATGACTCAACAATTGACAGAAAAGAGTGACGTGTATAGTTTCGGAGTACTAATGTTGGAACTGATCACAGCAAGAATGCCAATAGAACGAGGAAAATACATTGTGAAAGTGGTTAAGAATGCCATAGACAAGGACAAAGAGTTCTATGGCCTTAAGGAAGTCCTTGACCCATCCCTTGATTTGGGAACAACACCACAGGGTTTTGACAAGTTTGTTGATGTTGCAATGCAATGTGTTGATGAGTCAAGTTCTAGCAGACCTTCAATGAACTTTGTGGTGAAAGAGATTGAGAAGATGTTGCAGTTGGCTGGTTCAAACCCCAATGCAGAGTCTGCGTCGACTTCATCCAGTTATGAAGTAAGCAAAGGGAGTTCTCAACATCCTTACAACAATGAGTTGTTTGATTCAAGTGTGGTGATTCCACGTCCTTAA | 2853 | 0.4073 | MDKRVLIFLLLIFSSLLAVAARTANQDYQTLLALKNEWQNTPPDWDRSNDPCGDRWVGIGCINGAVTSITLASMNLRGQLSSEIGRLSELRILDLSYNKNLTGPLPIAIGNLRKLTNLILADCGFSGVIPDTIGNLQRLAFLSLNSNNFNGQIPATIGNLTNLSWLDLAENQLEGPIPISNGTSPGLDMLHHTKHFHFGANELSGNIPPQLFSSDMSLIHVLFEGNKFTGNVPSTLGLVQSLEVLRLDGNFLSGLVPANISNLKNLRDLLLSNNRLSGPLPNLSGMNILNFLDVSNNSFDPSEFPLWLTNLSSLTTLAMENIQLQGNIPVSFFSLSQLQTVNLKDNQLNGTLDIGTTISNQLEIVDLQTNYIDKFNPEINVSKVEIRLVDNPVCGGGALQDYCSIPQQNNLYTTPLNNCVPVTCSTDQKQSPNCKCAYPYTGTLTFRAPSFSDLQNQSVFALLESSMMRTFHQNNLPVDTVSVSNPRKVELYLDLSLEVFPSGQDRFNRTGIINIGFVLSNQSYKPPAPFGPFIFLADNYENYMDDSVLISSGGSKKSSNTGIIAGVAGGIVLVILLIIAGVYVLYQKNKAKRAKEKNNPFAKWEEDASNTSIPQLKGARHFTFEEIQNYTKNFSQANGIGSGGYGKVYRGTLQNGQLIAVKRAQKESMQGGLEFKTEIEMLSRVHHKNLVSLIGFCFEQGEQMLIYEYVPNGTLKDTLSGKSGIRLDWIRRLKIALGAARGLDYLHEHADPPIVHRDIKSTNILLDERLNAKVSDFGLSKPLGDGEKGYVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELITARMPIERGKYIVKVVKNAIDKDKEFYGLKEVLDPSLDLGTTPQGFDKFVDVAMQCVDESSSSRPSMNFVVKEIEKMLQLAGSNPNAESASTSSSYEVSKGSSQHPYNNELFDSSVVIPRP | 950 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc272069g00003 | 950 | MobiDBLite | consensus disorder prediction | 911 | 940 | - | - | |
Stsc272069g00003 | 950 | SUPERFAMILY | Protein kinase-like (PK-like) | 620 | 926 | IPR011009 | - | |
Stsc272069g00003 | 950 | SUPERFAMILY | L domain-like | 49 | 426 | - | - | |
Stsc272069g00003 | 950 | MobiDBLite | consensus disorder prediction | 911 | 950 | - | - | |
Stsc272069g00003 | 950 | Pfam | Leucine rich repeat | 113 | 173 | IPR001611 | GO:0005515 | |
Stsc272069g00003 | 950 | ProSiteProfiles | Leucine-rich repeat profile. | 265 | 287 | IPR001611 | GO:0005515 | |
Stsc272069g00003 | 950 | Gene3D | Phosphorylase Kinase; domain 1 | 604 | 709 | - | - | |
Stsc272069g00003 | 950 | Gene3D | Transferase(Phosphotransferase) domain 1 | 710 | 929 | - | - | |
Stsc272069g00003 | 950 | FunFam | Leucine-rich repeat protein kinase family protein | 597 | 709 | - | - | |
Stsc272069g00003 | 950 | Gene3D | Ribonuclease Inhibitor | 286 | 404 | IPR032675 | - | |
Stsc272069g00003 | 950 | Pfam | Protein tyrosine and serine/threonine kinase | 638 | 902 | IPR001245 | GO:0004672|GO:0006468 | |
Stsc272069g00003 | 950 | FunFam | Leucine-rich repeat protein kinase family protein | 183 | 282 | - | - | |
Stsc272069g00003 | 950 | Pfam | Leucine rich repeat N-terminal domain | 24 | 61 | IPR013210 | - | |
Stsc272069g00003 | 950 | ProSiteProfiles | Protein kinase domain profile. | 634 | 907 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc272069g00003 | 950 | FunFam | LRR receptor-like serine/threonine-protein kinase HSL2 | 710 | 919 | - | - | |
Stsc272069g00003 | 950 | CDD | STKc_IRAK | 640 | 906 | - | - | |
Stsc272069g00003 | 950 | ProSitePatterns | Protein kinases ATP-binding region signature. | 640 | 662 | IPR017441 | GO:0005524 | |
Stsc272069g00003 | 950 | PANTHER | RECEPTOR-LIKE PROTEIN 55 | 35 | 906 | - | - | |
Stsc272069g00003 | 950 | SMART | serkin_6 | 634 | 907 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc272069g00003 | 950 | Gene3D | Ribonuclease Inhibitor | 182 | 285 | IPR032675 | - | |
Stsc272069g00003 | 950 | Gene3D | Ribonuclease Inhibitor | 23 | 181 | IPR032675 | - | |
Stsc272069g00003 | 950 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 754 | 766 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc272069g00003 | 950 | FunFam | Leucine-rich repeat family protein | 26 | 182 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc272069g00003 | Stsc-Chr272069 | 19798 | 25923 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc272069g00003 | 7 | 948 | Receptor kinase-like Gene Family | AT5G49760 | 56.962 | 0.0 | 1001 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VIII-1 | Stsc272069g00003 | PK_Tyr_Ser-Thr | 1.9e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc272069g00003 | - | - | aip:107638780 | 1607.42 |