Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272067g00004 ATGGCTTCCAATGTGTCAAATCAATCTCGTAATGTTCTTAGCAAAAAAGTCATGGTTAAGAAAGAGGATGCTATGGACAACATAACCCTCTTCTCTATAATAACGATAATGTCCTTCTTCTTGTTAGCACCTGTGGCTTTTGTCATGGAGGGTGTCAAATTTACCCCTGCTTACCTTCAATCTGCTGGTTTAAATATGAGACAAGTGTACATTAGATCTCTTCTTGCTGCACTCTGTTTCCATGCATATCAGCAAGTTTCTTACATGATATTGCAGAGAGTATCACCTGTTACTCACTCTGTGGGCAACTGTGTGAAGAGGGTTGTGGTCATTGTTAGCTCTGTCATCTTCTTCCAGACACCCGTCTCTCCTGTGAACGCTTTCGGAACTGCTATAGCTCTTGCTGGAGTTTTCCTCTACTCAAGAGTGAAGAGAATTAAGCCAAAGGCCAAGACAGCTTAA 462 0.4177 MASNVSNQSRNVLSKKVMVKKEDAMDNITLFSIITIMSFFLLAPVAFVMEGVKFTPAYLQSAGLNMRQVYIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPVNAFGTAIALAGVFLYSRVKRIKPKAKTA 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272067g00004 153 PANTHER SOLUTE CARRIER FAMILY 35 1 147 - -
Stsc272067g00004 153 Pfam Triose-phosphate Transporter family 1 141 IPR004853 -
Stsc272067g00004 153 SUPERFAMILY Multidrug resistance efflux transporter EmrE 58 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272067g00004 Stsc-Chr272067 28041 29290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272067g00004 1 153 Antiporters AT5G33320 82.353 2.49e-82 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272067g00004 K15283 - gmx:100804563 266.159