Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272066g00003 ATGGGGAAGTACATGAAGAAATCAAAGATGGGAGGCGAAGTTGCAGTCATGGAGGTCTCATCTGCTTCTACTGCTCCTTCTCCAATGGGAGTTCGCACACGAGCCAAAACCCTCGCTCTTCAGAAATCTTCTCCTCCTTCTCCGCCGCCGCCGCCGTCTTCACCGGATGCCCCGTCGTTTGACTACATTCAGTTACGAAGCCGCCGTCTCCAGAAGGTTCTTGTCCGCCCTAAGAACCAACCGCCCGCCAAGCAGTCCGGATTTTGCAGCGCCGCCGCGCCGGTCAGCTCTAGGACGCTGACCGAGCAGAAGAGGCTGCCCGTTGATTCTGAGGAGAACGCTGAGTTTTCGTTTGGGGAAAACACTTTAGAAACTGAAGCAAGAGATAGGAGCACAAGGGAAAGCACACCATGCAGTTTAATAAGGGATTCAAATGCCATTGACACACCTGGTTCAACCACAAGGCAAAGGACATCATCAACTTTCACAAACCCAATGATCCTTGAACACATTCAAAGAAATATTCTAACTACTTATGAGATGGAGGAGTTCTTTGCTTGTGCAGAGCAGCAGCAACAGAAAATATTTATGGACAAGTACAATTATGACATTGTGAATGATGTACCCCTCTCAGGACGTTATGAATGGGTCCAAGTACATCACTAG 666 0.4895 MGKYMKKSKMGGEVAVMEVSSASTAPSPMGVRTRAKTLALQKSSPPSPPPPPSSPDAPSFDYIQLRSRRLQKVLVRPKNQPPAKQSGFCSAAAPVSSRTLTEQKRLPVDSEENAEFSFGENTLETEARDRSTRESTPCSLIRDSNAIDTPGSTTRQRTSSTFTNPMILEHIQRNILTTYEMEEFFACAEQQQQKIFMDKYNYDIVNDVPLSGRYEWVQVHH 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272066g00003 221 MobiDBLite consensus disorder prediction 43 57 - -
Stsc272066g00003 221 MobiDBLite consensus disorder prediction 83 103 - -
Stsc272066g00003 221 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 1 221 IPR044275 GO:0004861|GO:0045736|GO:0051726
Stsc272066g00003 221 MobiDBLite consensus disorder prediction 19 61 - -
Stsc272066g00003 221 MobiDBLite consensus disorder prediction 76 113 - -
Stsc272066g00003 221 Pfam Cyclin-dependent kinase inhibitor 177 219 IPR003175 GO:0004861|GO:0005634|GO:0051726
Stsc272066g00003 221 Gene3D p27 171 221 IPR044898 -
Stsc272066g00003 221 PIRSF CKI_KRP_plant 1 221 IPR044275 GO:0004861|GO:0045736|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272066g00003 Stsc-Chr272066 19903 23066 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272066g00003 1 219 Core Cell Cycle Gene Families AT5G48820 47.826 5.45e-54 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272066g00003 - - gmx:100782146 184.882