Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272058g00007 ATGGCCACTTCACCCGTTGTGGATGAATTTGATGAATCCATGAAGAAACAGATATCATACCTTTGGCGGGTTATGAGCTCAGTTAAATCCTTCAAAGAGGATAATACGCCTTGCAAAATTGACGAGGGTCTCTATTTGGGTTCCATTGGCGCTGCAGCTAACAAGATTGCATTGAAAAGCTTAAATGTTACTCACATTTTGACTGTTGCTAGAAGACTGCCACCTATGAATCCTGGGGATTTTGTCTATAAAGTTATAAACGTTGCTGACAAAGATGACGTTGACTTGAAACAATACTTCAATCAGTGCTTTGATTTTATTGAGGATGCCAAAATGCATGGCGGAGCTGTCTTGGTTCATTGTTTGGCAGGAAAATCAAGGAGCTTGCCCAGAAGCAGTAAAGGGATTATAGGCCTTTCAAGGTCACAACTCAGCGTTCCCAGCACAACACACATTGATAAGCCAACTTCCCCCCAAGTTTTCAGTTTACCTTCTTCAAATGAGAACAGATTTGGTAACATCTTCATTGGAGCCTGGGGATACCCTCAAGTTGAATCCAAGTTTCTCCAAACTACACCACTGGTGGAGTTGTTTCACAAGGTGTTCCCTCTGGCGAATACTTCATTGATGTAA 633 0.4202 MATSPVVDEFDESMKKQISYLWRVMSSVKSFKEDNTPCKIDEGLYLGSIGAAANKIALKSLNVTHILTVARRLPPMNPGDFVYKVINVADKDDVDLKQYFNQCFDFIEDAKMHGGAVLVHCLAGKSRSLPRSSKGIIGLSRSQLSVPSTTHIDKPTSPQVFSLPSSNENRFGNIFIGAWGYPQVESKFLQTTPLVELFHKVFPLANTSLM 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272058g00007 210 CDD DSP 37 128 - -
Stsc272058g00007 210 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 34 128 - -
Stsc272058g00007 210 Gene3D Protein tyrosine phosphatase superfamily 11 129 IPR029021 -
Stsc272058g00007 210 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 34 128 IPR029021 -
Stsc272058g00007 210 SMART dsp_5 36 150 IPR020422 GO:0006470|GO:0008138
Stsc272058g00007 210 Pfam Dual specificity phosphatase, catalytic domain 44 128 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272058g00007 Stsc-Chr272058 34090 44166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272058g00007 5 127 Protein tyrosine phosphatase (PTP) family AT3G23610 54.472 7.85e-48 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272058g00007 - - lang:109352945 184.882