Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272057g00004 ATGTCTAACCTTATGATGATGATGAATCATGGAAAACGTGTTGTGGCTGTGGCAATTGAGAATAACAAAACAAGCCAAAGTGCTGCAAAATGGGCAGTGGATAATATTCTTCCAAGGGATCAAGATCTCTTACTAATCCATGTTAAGCAAAGATCATTATCAGATAATCGTCCACCATTGAGAAGCTATGATATGAACGAAGATTCGGATATACCACTTGACAAAGAATCAAAGGAGCTTTTTGAGTCATTTCGAGTCTTTTGCAACAGAAAGAATGTACACTTCAAAGAAATTTTGTTGGAGGACACAGATATATCAAAGGCATTAATAGAAAGTGTCACCACATATTCCATTGAGCTTCTTGTTCTTGGGGCAGCATCAAGGGGTGGCCTTGCTAGATTTAGGATGAGTGATATTCCAAGCACGGTGTCAAAAGCTGCACCAGCATTCTGCACCGTCTACATAATCTCCAAAGGGAAAATCTCATCCGTTAAAACTGCGACTGTATCACTTCCTCAAAAACCTGCGCCGCACAATAACAGTGTCCACTCTCCTCATCATGCTGATAGAGATAGACCACGCAACCTCACACTACCACGACATGTTGGAACTGGATACCAATCTCATGATTTTGATGATATATCAAGACAAGGATCATTTCCAGACAGACATGGATATTCACGCCGTGGTAGTCGTGATAGTGATGAAGTCATAACACCATTCGAGGCAAAAGGAAGAACATACGCAACAAATAATGTACCTGAAGATTGTGACATATCATTTGTGGCGAGTGCAAAACCAAGTGTTGATAAGCTCTTCCCTTCATTGTATGCTGATGATGATTTTGATGGAAGCAGAACAAGATCTCCCCAAGCTTCATCAGGTTCTGGAGGAGCACAGAAATCTTTCATGTGTGATGACTACTCATACACCTCTCTATCAAACTCAACAGATAGCAATGATGAAATGGAAGCTGAGGTGAGGAAGCTAAAGCTAGAGCTGAAGCAGACAATGGAAATGTATAGCTCGGCTCGCAAGGAAGCTCTAACAGCAAAGGAGAAGGCATTGGAGCTTCAACGTTGGAAAATGGAAGAACAGAGGAAGATGGAAGACTTGCAAATGACCGAAGGAGCGGCATTGGCCACTCCGGGTAAGGAGAAAGAAAAGGATATGGATGCCATGAGGGTGGTAGAAGCAACTCAAAGGATGGCAGAGGTTGAAGCACAGAAAAAAATTAGTCCAGAGAAAAAACCTATGCCAGAAGCACAACAGATGAAGAGGGAACTAGAATCTCTAGGAGCTGGTGCCATGTACCGAAGGTACTCCATTGAGGAAATCGAGCAAGCGACACGAAATTTCTCAGGGGAATTCAAGGTCGGTGAAGGAGGCTATGGCCCTGTATACAAGGGTGAATTAGATCACACACCAGTTGCAATAAAAGTTTTGAGGCCAGATGCAACTCATGGAAGGGAACAATTTAACCGAGAGGTTGAAGTGTTGACTTGTATAAGGCATCCAAACATGGTTCTCCTCCTTGGAGCATGTCCAGAGTATGGTTGCCTAGTGTATGAATACATGGCTAATGGGAGCTTGGACGATTGCCTCTTCCGACGAGGGAAGTTACCGGCTCTTCCTTGGCAGCTAAGGTTCCAAATTGCTGCAGAGATAGCCACAGGCCTTCTATTCCTTCACCAGACAAAGCCAGAGCCACTTGTACACCGCGACTTGAAACCAGGAAACATTTTGCTAGACCGGAACTTCGTGAGCAAGATCAGTGATGTTGGGTTAGCCAGGCTTGTCCCACCTTCAGTTGCAGATGCCGTGACTCAGTATCGCTTGACATCTACTGCCGGAACATTCTGTTACATTGACCCTGAGTACCAACAGACTGGCATGCTTGGTATCAAGTCTGATATTTACTCGCTTGGGATCATGCTTCTCCAAATTGTGACAGCTAGGTCACCAATGGGTTTGGCTCATCATGTTAAGAGGGCGATTGCGAAGGGAACTTTGGAAGAGGTGCTTGATCCAGCTGTTCCTGACTGGCCAATGGAGCAGACCTTGCATTTCACCAAACTCGCCTTGAAATGTGCCGAAATGATGAGAAAAGATAGACCTGATCTTGGGAAAGTTGTGTTACCTGAGCTCAATAAACTAAGGACATTAGCTGAAGAAAACATGCCTCCTATGATGATATTTGGAAGAGCCTTCTCTTCGGTACCACCACAATGTAAATGA 2238 0.4415 MSNLMMMMNHGKRVVAVAIENNKTSQSAAKWAVDNILPRDQDLLLIHVKQRSLSDNRPPLRSYDMNEDSDIPLDKESKELFESFRVFCNRKNVHFKEILLEDTDISKALIESVTTYSIELLVLGAASRGGLARFRMSDIPSTVSKAAPAFCTVYIISKGKISSVKTATVSLPQKPAPHNNSVHSPHHADRDRPRNLTLPRHVGTGYQSHDFDDISRQGSFPDRHGYSRRGSRDSDEVITPFEAKGRTYATNNVPEDCDISFVASAKPSVDKLFPSLYADDDFDGSRTRSPQASSGSGGAQKSFMCDDYSYTSLSNSTDSNDEMEAEVRKLKLELKQTMEMYSSARKEALTAKEKALELQRWKMEEQRKMEDLQMTEGAALATPGKEKEKDMDAMRVVEATQRMAEVEAQKKISPEKKPMPEAQQMKRELESLGAGAMYRRYSIEEIEQATRNFSGEFKVGEGGYGPVYKGELDHTPVAIKVLRPDATHGREQFNREVEVLTCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRRGKLPALPWQLRFQIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVADAVTQYRLTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQIVTARSPMGLAHHVKRAIAKGTLEEVLDPAVPDWPMEQTLHFTKLALKCAEMMRKDRPDLGKVVLPELNKLRTLAEENMPPMMIFGRAFSSVPPQCK 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272057g00004 745 FunFam Os07g0541700 protein 526 616 - -
Stsc272057g00004 745 Gene3D Transferase(Phosphotransferase) domain 1 526 729 - -
Stsc272057g00004 745 PANTHER OS02G0152300 PROTEIN 14 729 - -
Stsc272057g00004 745 MobiDBLite consensus disorder prediction 171 235 - -
Stsc272057g00004 745 ProSiteProfiles Protein kinase domain profile. 453 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272057g00004 745 CDD STK_N 14 159 - -
Stsc272057g00004 745 Pfam Protein kinase domain 458 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272057g00004 745 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 425 525 - -
Stsc272057g00004 745 Coils Coil 313 366 - -
Stsc272057g00004 745 MobiDBLite consensus disorder prediction 215 235 - -
Stsc272057g00004 745 Gene3D HUPs 5 158 IPR014729 -
Stsc272057g00004 745 SUPERFAMILY Protein kinase-like (PK-like) 434 712 IPR011009 -
Stsc272057g00004 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 571 583 IPR008271 GO:0004672|GO:0006468
Stsc272057g00004 745 SMART serkin_6 453 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272057g00004 745 MobiDBLite consensus disorder prediction 279 300 - -
Stsc272057g00004 745 Pfam Universal stress protein family 13 149 IPR006016 -
Stsc272057g00004 745 Gene3D Phosphorylase Kinase; domain 1 431 525 - -
Stsc272057g00004 745 MobiDBLite consensus disorder prediction 183 197 - -
Stsc272057g00004 745 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 15 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272057g00004 Stsc-Chr272057 40155 44222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272057g00004 15 727 Receptor kinase-like Gene Family AT5G35380 53.279 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Stsc272057g00004 PK_Tyr_Ser-Thr 4.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272057g00004 - - adu:107490100 1201.42