Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272051g00001 ATGTACCATCATCATCAAGGAGGGAAGAACATCCATTCTGAGAGGCACATGTTCCTTCAAGCTGCTGCTTCAAATGGGTCAGGGGGTGAGTCTGGGCCTGTGCTCTCCACAGATGCCAAGCCTAAACTAAAATGGACACCAGATCTTTATGCCAGGTTCATAGAAGCAGTTCATCAGCTAAGTGGATCTGATAAGGCAACTCCAAAAACAGTAAAGAAACACATGGGAATTCCAGGGCTCACCTTATGTAAAATGGTATCTAGCTTGAGTGACACTTAG 279 0.4516 MYHHHQGGKNIHSERHMFLQAAASNGSGGESGPVLSTDAKPKLKWTPDLYARFIEAVHQLSGSDKATPKTVKKHMGIPGLTLCKMVSSLSDT 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272051g00001 92 Gene3D - 39 91 - -
Stsc272051g00001 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 13 87 IPR044848 GO:0003700
Stsc272051g00001 92 MobiDBLite consensus disorder prediction 1 39 - -
Stsc272051g00001 92 NCBIfam myb-like DNA-binding domain, SHAQKYF class 40 84 IPR006447 GO:0003677
Stsc272051g00001 92 SUPERFAMILY Homeodomain-like 39 87 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272051g00001 Stsc-Chr272051 15782 18479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272051g00001 29 89 G2-like Transcription Factor Family AT1G79430 57.377 7.72e-19 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Stsc272051g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272051g00001 - - cmo:103502977 125.561