Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272049g00007 ATGAAGAACTTCATTGTTGTGTTCTTTGCTTATTTTGTGTTGTTATTCTGGGCATACTCCGGGTATGCCCAAGATACAACAACACTTGTTCCGGCCATCATAACGTTTGGCGACTCCGCCGTGGATGTTGGAAACAATGACTATCTCCCAACACTGTTTAAAGCTAATTACCCTCCTTATGGGAGGGATTTTGTTAATCACCAACCAACAGGGAGGTTCTGTAATGGTAAACTAGCTACTGATATTACTGCTGAGACACTAGGATTCAAGAGCTATGCACCAGCATATCTTAGTCCAGAGGCATCAGGGAAGAACCTCCTCATTGGAGCCAACTTTGCTTCAGCTGCATCTGGTTATGATGAAAGAGCTGCTATTTTGAATCATGCAATTCCATTGTCACAACAATTAGAATATTTCAAGGAATACCAAAGCAAACTGGCACAGGTGGCTGGAAATACCAAATCAGCCTCAATAATAAAGGATGCATTGTACTTATTGAGTGCTGGAAGTAGTGATTTTGTGCAAAATTACTATGTTAACCCTTTGATCAACAGTGCCTTCACTCCTGACCAATATGGCTCTTCCCTTGTGGATTCATTCACAAGCTTCATTAAGGAGTTGTATGGATTGGGAGCAAGAAGAATTGGAGTGACATCACTGCCACCATTGGGGTGCTTACCAGCTGCAAGAACTTTATTTGGTTCCCATGAGAATGGATGTGTCTCAAGAATCAACACTGATTCGCAGGGATTCAACAAGAAGATTAACTCAGCTGCTTCAAACCTTCAGAAACAACTTCCTGGCCTTAAGGTTGTTGTGTTTGACATTTACAAGCCTCTGCTTGACCTTGTTCAGTCCCCTGCAAAATCTGGTTTTGTGGAGGCAAGGAGAGGTTGCTGTGGAACAGGGACAGTAGAGACAACAATCCTGTTATGCAATCCACACTCACCAGGAACTTGTCCTAATGCTACCCAATATGTCTTTTGGGACAGTGTCCATCCTTCACAAGCTGCTAACCAAGTTCTTGCTGATTCTTTGATTCTAGAAGGCATTGCTCTTATCTCATGA 1068 0.426 MKNFIVVFFAYFVLLFWAYSGYAQDTTTLVPAIITFGDSAVDVGNNDYLPTLFKANYPPYGRDFVNHQPTGRFCNGKLATDITAETLGFKSYAPAYLSPEASGKNLLIGANFASAASGYDERAAILNHAIPLSQQLEYFKEYQSKLAQVAGNTKSASIIKDALYLLSAGSSDFVQNYYVNPLINSAFTPDQYGSSLVDSFTSFIKELYGLGARRIGVTSLPPLGCLPAARTLFGSHENGCVSRINTDSQGFNKKINSAASNLQKQLPGLKVVVFDIYKPLLDLVQSPAKSGFVEARRGCCGTGTVETTILLCNPHSPGTCPNATQYVFWDSVHPSQAANQVLADSLILEGIALIS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272049g00007 355 SUPERFAMILY SGNH hydrolase 33 346 - -
Stsc272049g00007 355 Pfam GDSL-like Lipase/Acylhydrolase 33 345 IPR001087 GO:0016788
Stsc272049g00007 355 CDD SGNH_plant_lipase_like 31 347 IPR035669 -
Stsc272049g00007 355 FunFam GDSL esterase/lipase APG 22 351 - -
Stsc272049g00007 355 Gene3D SGNH hydrolase 22 349 IPR036514 -
Stsc272049g00007 355 PANTHER GDSL ESTERASE/LIPASE EXL3 12 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272049g00007 Stsc-Chr272049 46842 49162 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272049g00007 31 349 Pollen Coat Proteome AT1G75910 35.494 1.71e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272049g00007 - - gsj:114422362 602.053