Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272046g00011 ATGGGTCACATGGACCTCGGTGTGATCACTCATGAAGCAAGGAAATTTCCAGTTGAGTTAAGGCCTCGACTTGATTCATATATTGTCTACTTGGGATCTCAATCTTTTGGTCAAGATCCTACATTAGTTGATGCTGAATATGTCACAAACTCTCACTATAATTTACTTGGATCTTATGTTGGAAGCGTTGATAAGGCCAAAGAAGCAATCTTTTACTCTTATAACAAGTACTTCAATGGTTTTGCTGCAGTGCTTGATGAGGAAGAAGCAGCCAAGATTGCAAAACATCCAGAAGTATTATCAGTTTTCCCAAACAAACGAAGAGAGCTGCACACAACCCATTCATGGAGTTTTCTTGGATTAGGAACAGATGGTGGTGAAATTGCAGAGCAATCAATATGGAAGGAGTCCTTGGGTCAAGATGTAATTATTGCAAACTTGGACACCGGTGTGTGGCCTGAATCAAAGAGTTTTAGTGATGAAGGGTATGGGCCAATTCCAAAAAGATGGCGTGGAATTTGTCAAGTTGATGAGGAGAATTTATTTAAATTTCACTGCAACAGGAAACTGATTGGAGCAAGATATTTTAACAAAGGCTACGTAGCAGCTCTTGGGATAAGCCAACCCAATACTACTCGTGACTTTGAAGGTCATGGTTCACATACCCTATCCACTGCAGGTGGGAACTTTGTTCCGGGGGCGAACGTATTCGGAAACGGAAATGGAACGGCAAGTGGTGGATCACCAAAAGCTCGTGTAGCAGCATACAAAGTTTGTTGGCCGCAAGAGAGTGACGGAAGTGGTGGAGGTTGTTTTGACGCAGACATTTTGGCTGCATTTGAAGCAGCCATAAGTGATGGTGTTGATGTAATATCAGTATCGCTGGGCAGTAATGTTCCTTATGAGTTTTTCCAAAGTGGCACCTCCATTGGCTCTTTCCATGCTGCAGTTCTGCATGGTATAACTGTTGTGGCTTCAGCTGGAAACAGTGGACCATTTTCATCTACTGTGAGCAACTATGAGCCGTGGGTCATCACTGTTGCTGCAAGCACCATTGATAGAGTTTTTGCTAACCGCGTCCTTCTTGGTGGTGATAACAGAATTGTCAGGGGAACAAGCCTTTCAGAGTTTGATTTGCCATATAGTAAGTTTTACCCGTTGATCAAGGCTGTTGATGCTAAAGTAGCCACTGCAAATGACATACAAGCGAGTCAATGCCAAGCTGAAACTCTTGATCCTAAGAAGGCAAAGGGAAAAATAGTGATTTGTGTTCGTGGTGTGAATGCGAGAGTTGCAAAAGGGGCTGAAGCTGCTCGTGCTGGAGCTACCGGAATGATTTTGGTTAATACTGAATTAATAGATGACCTTGAAGCTGATCCTCATGTCATTCTTGCCTCACAAGTTCATTTTGATGAGGGCAATTATATCTATTCTTACATGAACCGAACCAAATCCCCTGTGGCTTCCATTTCTAGAGTGAGAACACTATTGCACACTAAACCAGCTCCAGTTATGGCTTCATTTTCATCAAGAGGGCCAAGTCCCCTTGAGCCATCCATCCTTAAGCCGGACATTACTGCTCCAGGAGTGGATATCATTGCAGCTTACAGTGAAGGTTTACCTCCATCAGAGCTACCATCTGATAAACGTAGAACTCCTTTCATTACCATGTCAGGCACTTCAATGTCATGTCCTCATGTTTCCGGTGTTGTTGGCCTCCTCAAATCACTTCATCCTGATTGGAGTCCTGCAGCTATTAAGTCCGCAATCATAACCACCGCAAGAGTAAGAGACAACACTGGAGGGACAATTCTGGAATCAGAAACAGAGAGGGGAACTCCATTTGCTTATGGTGCAGGTCACATTTCCCCTAATCTTGCAGCATATCCAGGACTTGTATATGATCTAACTATGATTGATCACCTAAACTTCTTGTGTGGTCATGGTTACACTGGTGCTCAAATAAGAATATTCATTGGCAAGAAATACATTTGTCCAGAGATTCTTGACCCAGCAGATTTCAACTACCCATCTATCACAGTTAATCACTTTTCCAATTCAACTGCTTCTCGGCACGTGACTCGCACGGTCACAAATGTTGGGTCACCAGGAACATACAAAGTGAGTGTCAGATCACCCCCTGAAGCAGTTATTTCAGTTGATCCTGAGATTCTAAGCTTCAAGAGAAAAGGTGAAAAGAAGAGTTTCACAGTCACAATAAGTTTGAAGTCATTGGAAAACCAGAATCATAATTATACATTTGGAGATTTGGATTGGAGTGATGGCAAGAACCATGTTAGGAGTTCCATTGTGATTAAGCTTCCATGA 2328 0.4274 MGHMDLGVITHEARKFPVELRPRLDSYIVYLGSQSFGQDPTLVDAEYVTNSHYNLLGSYVGSVDKAKEAIFYSYNKYFNGFAAVLDEEEAAKIAKHPEVLSVFPNKRRELHTTHSWSFLGLGTDGGEIAEQSIWKESLGQDVIIANLDTGVWPESKSFSDEGYGPIPKRWRGICQVDEENLFKFHCNRKLIGARYFNKGYVAALGISQPNTTRDFEGHGSHTLSTAGGNFVPGANVFGNGNGTASGGSPKARVAAYKVCWPQESDGSGGGCFDADILAAFEAAISDGVDVISVSLGSNVPYEFFQSGTSIGSFHAAVLHGITVVASAGNSGPFSSTVSNYEPWVITVAASTIDRVFANRVLLGGDNRIVRGTSLSEFDLPYSKFYPLIKAVDAKVATANDIQASQCQAETLDPKKAKGKIVICVRGVNARVAKGAEAARAGATGMILVNTELIDDLEADPHVILASQVHFDEGNYIYSYMNRTKSPVASISRVRTLLHTKPAPVMASFSSRGPSPLEPSILKPDITAPGVDIIAAYSEGLPPSELPSDKRRTPFITMSGTSMSCPHVSGVVGLLKSLHPDWSPAAIKSAIITTARVRDNTGGTILESETERGTPFAYGAGHISPNLAAYPGLVYDLTMIDHLNFLCGHGYTGAQIRIFIGKKYICPEILDPADFNYPSITVNHFSNSTASRHVTRTVTNVGSPGTYKVSVRSPPEAVISVDPEILSFKRKGEKKSFTVTISLKSLENQNHNYTFGDLDWSDGKNHVRSSIVIKLP 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272046g00011 775 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 111 IPR037045 -
Stsc272046g00011 775 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Stsc272046g00011 775 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Stsc272046g00011 775 PRINTS Subtilisin serine protease family (S8) signature 558 574 IPR015500 -
Stsc272046g00011 775 FunFam Subtilisin-like protease SBT1.5 645 775 - -
Stsc272046g00011 775 FunFam subtilisin-like protease SBT1.5 353 497 - -
Stsc272046g00011 775 CDD PA_subtilisin_like 360 490 - -
Stsc272046g00011 775 CDD Peptidases_S8_3 109 594 IPR034197 -
Stsc272046g00011 775 Gene3D Peptidase S8/S53 domain 141 640 IPR036852 GO:0004252|GO:0006508
Stsc272046g00011 775 Pfam Fibronectin type-III domain 673 772 IPR041469 -
Stsc272046g00011 775 Pfam PA domain 397 475 IPR003137 -
Stsc272046g00011 775 ProSitePatterns Serine proteases, subtilase family, serine active site. 559 569 IPR023828 -
Stsc272046g00011 775 Gene3D - 645 774 - -
Stsc272046g00011 775 Pfam Subtilase family 139 620 IPR000209 GO:0006508|GO:0008236
Stsc272046g00011 775 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 771 IPR045051 -
Stsc272046g00011 775 Pfam Peptidase inhibitor I9 26 111 IPR010259 -
Stsc272046g00011 775 FunFam Subtilisin-like protease SBT5.3 18 111 - -
Stsc272046g00011 775 ProSiteProfiles Serine proteases, subtilase domain profile. 115 628 - -
Stsc272046g00011 775 SUPERFAMILY Subtilisin-like 110 631 IPR036852 GO:0004252|GO:0006508
Stsc272046g00011 775 FunFam Subtilisin-like protease SBT1.5 141 363 - -
Stsc272046g00011 775 SUPERFAMILY PA domain 391 487 IPR046450 -
Stsc272046g00011 775 Gene3D - 353 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272046g00011 Stsc-Chr272046 51539 61040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272046g00011 26 774 Subtilisin-like Serine Gene Family AT5G59810 56.159 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272046g00011 - - vvo:131629798 915.22