Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272044g00004 ATGTCCAACTCCAACATGAAAATGATTAAGAAGGATGATGGTGATGATGATCGTATAATAAAGGCAATAATAGAGGAGGAGCTTGTGAGAGGGCGTGAATTTGCCAATCAGTTAAGGCAACTTATCGTCATCAACAAAACTAATAATAATAATGAAGTAAACTCAGCATATCATCATAATCATCTTCTCAGTAACGTCATCTCCTCCTTCGCTAACACCCTCTCTCTGTTGAACAAATATCCAATACATCCTATTAACCAATCTTCTTCTTCTTCTTCTTCCCCTAATAATAATGATGATCTCATGCAAATGCAACCCCCACAACCACAACAGCTCCACTCTCGCTTGCTTACATATGATCAACACATTTGCAGTACCCAGCCGGACAGAAGAGGCTCTTACAGGAGAAAAAGAAACATGGAAACATGGACGGAGGAGTCGGAGAAGGAAAGAGAGGAAGATGGGCATCAATGGAGGAAGTACGGACAGAAAGCAATCCAGAAAGAGAAGTACACAAGAAACTACTTTCGCTGCACTCATAAGTACGAACAGGGATGTCAAGCAACCAAGCAGGTTCAGAAGCTTCAAGAGAATCCTCCTTTGTACAGAACCACCTACTATGGCTGCCATACCTGCACTAACCTAGACACTAATAACCACATTCTCATCATGGAGGAAGATGGCCCTAATAATACTTCTTCTTCCTCCATATTCCTCAGCTTTGATAACTCCCTCCCTAATCCACCAACCAATCCCTTTTTTTCATCAACAACAACACAACCACCACCACCTAAGATGATGAAGGAGGAGGAGGATAAGGAAGTTGGTCCGTCAAGTTCCACCCACCCAGTTTTGGATGATTCATCAAACAATAATAATAGTAATATTTGCTGGGAGGATTTGATGATGATGATGGTGATGTCTCATCAGGAAGCCTTATACGGTTTCGTTGATGATGAGAAATAA 966 0.4141 MSNSNMKMIKKDDGDDDRIIKAIIEEELVRGREFANQLRQLIVINKTNNNNEVNSAYHHNHLLSNVISSFANTLSLLNKYPIHPINQSSSSSSSPNNNDDLMQMQPPQPQQLHSRLLTYDQHICSTQPDRRGSYRRKRNMETWTEESEKEREEDGHQWRKYGQKAIQKEKYTRNYFRCTHKYEQGCQATKQVQKLQENPPLYRTTYYGCHTCTNLDTNNHILIMEEDGPNNTSSSSIFLSFDNSLPNPPTNPFFSSTTTQPPPPKMMKEEEDKEVGPSSSTHPVLDDSSNNNNSNICWEDLMMMMVMSHQEALYGFVDDEK 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272044g00004 321 MobiDBLite consensus disorder prediction 127 154 - -
Stsc272044g00004 321 MobiDBLite consensus disorder prediction 86 109 - -
Stsc272044g00004 321 SUPERFAMILY WRKY DNA-binding domain 150 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc272044g00004 321 Pfam WRKY DNA -binding domain 153 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc272044g00004 321 ProSiteProfiles WRKY domain profile. 147 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc272044g00004 321 SMART WRKY_cls 152 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc272044g00004 321 MobiDBLite consensus disorder prediction 129 154 - -
Stsc272044g00004 321 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 28 235 IPR044810 GO:0003700
Stsc272044g00004 321 MobiDBLite consensus disorder prediction 248 291 - -
Stsc272044g00004 321 Gene3D WRKY domain 137 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272044g00004 Stsc-Chr272044 32132 33956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272044g00004 15 217 WRKY Transcription Factor Family AT3G56400 35.714 2.64e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc272044g00004 WRKY 2.5e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272044g00004 - - adu:107473290 318.546