Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272039g00007 ATGACATTTTTTTTCTTGGTCAACCCTCAGAATGCGTCAATCACGGATTCTGAGAAGCTCCTCGCCGCACGATCCTCCCCTCCTTCCATCCAAGCCGTTGATGAGGACAGAGAATGCGTCGTCGACGCATTGGCTTCAAACGTGAGCCACACGATGCAAGTGAGGGCTGATCTGCGCCGTCCGATTCTCTTCTCTTTCCTCAGAATCCGTGTGCGACGGATTCTCTCTCCACTTGGACCGTTCGATGATCAGCAGCCTTCATCTACACCAAGTGAGATGAAGAATAGAAACACTCTAACAGTCGGAGAGATGTCCGGAGAAGGAGAAATAGATCGGATGGAGACAGTGGCAACAGCCGAAAAGGACCCAAATGTGTCGTGGGCTAATAAACTCCGACGAGTAGACTCTCTCAATTTGGAAGCTGGAAGTGAAATCCATGCCTTTAATAATAAGATTAGCTGGAGAACAACTTTGAATTTGGCATTTCAAAGCATAGGGATTGTTTATGGTGATATGGGGACATCTCCGCTTTATGTGTATGCGAGCACCTTCACCAGTGGAATAAAAGACAAGGATGATATTCTTGGCGTCTTATCCCTCATCATCTATACCATTCTGCTCATACCTTTGCTCAAGTATGTCTGCATCGTATTATGGGCTAACGACAACGGCAACGGTGGAGCATTTGCACTGTATTCGCTCATATGCAGACACATAAAGATGAGCTTGATTCCGAATCAAGAACCAGAGGACAAGGAACTTTCTAACTACAAGCTGGAGTTACCTTCCAGCCAGCTCAGAATGAAGCAAATCCTTGAGAACAGTCATGTTGCCCGTGTTCTTCTTTTGCTTGCAACCATTCTCGGAACTGCCATGGTCATAGGAGACGGCATTCTCACTCCCTCAATTTCAGTCCTTTCTGCTGTAAGTGGAGTCACTACATCAATGGGTCAAGGATCTGAAGCCATGTTTGCGGATTTGGGTCACTTTAACGTTCGAGCAATTCAGATGAGTTTCTCTTTGGTTACATACCCTGCAGTATTGTGTGCATATACTGGGCAGGCAGCATTTCTACGAAAGTTCCCTGAAAAAGTGGGCAACACCTTCTATGAAAGTATACCGAAGCCCATATTTTGGCCAACATTTGTTGTGGCTGTTGGTGCTGCTATCATAGCAAGCCAAGCAATGATTTCAGGAGCATTTTCGATCATATCACAGGCCGTGAGACTAGGTTGTTTCCCACGAGTTAAGGTTGTACACACTTCTACTAAGCACGAGGGTCAGGTGTATATTCCTGAGATCAACTACATGTTCATGATTGCATGCATTATTATTTGTGCTGCCTTCAAGACCACAGAAAAGATTAGTCAAGCATACGGGATTGCAGTGATTGGAGATATGTTGATAACAACGTGTCTAGTTTCAGTGATAATGGCTGTAATATGGAAGAAGAGCATATGGCAAGTTGTTATGTTCTTATTGGTATTCGGGTGCACAGAAGCAATATATTTCTCATCTCAAATAACAAAGTTCATGGAAGGAGGATATCTTCCAATTGCGTCTGCTTTGTTCTTGACAATAATAATGGGAATCTGGCATTACGTGCACAAAGAGAGGTACATGTTCGAGCTGAAAAACAAAGTTTCCAGTGAATACTTAAAAGACTACTTGGCCACGAATGGGGACATAAGAAGAGTTCCCGGAGTGGGGCTTCTCTACTCTGAGCTTGTGCAAGGGATTCCTCCCATATTCCCCCATTTTATAGCATGTATGCCATCAATCCATTCAGTCCTTATCTTTGTTTCTATCAAAGTCATCCCTGTCAGCCAAGTTGCTTTGGAGGAGAGGTTTCTATTTCGCCATGTGGACCCCAAGGAATACCGAGTGTTCCGTTGCGTTGTTAGATGCGGTTACAAAGATAAAATTGAGGATGCTCTCGTCTTTGAATCGCAGTTAATACAGAATCTCAAGGCTTTCATTCAACAACAAGAAGAAGATAATGCTGAGGATGAGGTCCAGTTCATCGACATAGCAGTGCAAAATGGTGTCATGTACATGCTTGGCGAAGCTGAGGTAGTGGCTCAACCCAATTCCTCCTTCCTCAATAAGATAGTTGTTAATTATGCTTACCGTTTCTTAAGAAAGAATTCCCGCCAAGGAAACAAATTGATGGCAATCCCGCGAAAGAGACTTCTCAAGATTGGAATGACATATGAAATATAA 2223 0.4377 MTFFFLVNPQNASITDSEKLLAARSSPPSIQAVDEDRECVVDALASNVSHTMQVRADLRRPILFSFLRIRVRRILSPLGPFDDQQPSSTPSEMKNRNTLTVGEMSGEGEIDRMETVATAEKDPNVSWANKLRRVDSLNLEAGSEIHAFNNKISWRTTLNLAFQSIGIVYGDMGTSPLYVYASTFTSGIKDKDDILGVLSLIIYTILLIPLLKYVCIVLWANDNGNGGAFALYSLICRHIKMSLIPNQEPEDKELSNYKLELPSSQLRMKQILENSHVARVLLLLATILGTAMVIGDGILTPSISVLSAVSGVTTSMGQGSEAMFADLGHFNVRAIQMSFSLVTYPAVLCAYTGQAAFLRKFPEKVGNTFYESIPKPIFWPTFVVAVGAAIIASQAMISGAFSIISQAVRLGCFPRVKVVHTSTKHEGQVYIPEINYMFMIACIIICAAFKTTEKISQAYGIAVIGDMLITTCLVSVIMAVIWKKSIWQVVMFLLVFGCTEAIYFSSQITKFMEGGYLPIASALFLTIIMGIWHYVHKERYMFELKNKVSSEYLKDYLATNGDIRRVPGVGLLYSELVQGIPPIFPHFIACMPSIHSVLIFVSIKVIPVSQVALEERFLFRHVDPKEYRVFRCVVRCGYKDKIEDALVFESQLIQNLKAFIQQQEEDNAEDEVQFIDIAVQNGVMYMLGEAEVVAQPNSSFLNKIVVNYAYRFLRKNSRQGNKLMAIPRKRLLKIGMTYEI 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272039g00007 740 Pfam K+ potassium transporter 319 640 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc272039g00007 740 Pfam K+ potassium transporter 161 314 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc272039g00007 740 Coils Coil 653 673 - -
Stsc272039g00007 740 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 319 739 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272039g00007 Stsc-Chr272039 36029 42840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272039g00007 319 740 Inorganic Solute Cotransporters AT4G13420 50.105 3.66e-164 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272039g00007 K03549 - rcu:8287064 574.704