Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272037g00001 ATGGAAGTTAGTTCATCCATGGTGTTTATCATAATAAGCTTACTCTTCCTCATCTCTGTGCTATTGCCATGGATTACAAACAAGGGTAAGGGTGTCCATAAATTGCCACCTGGGCCATGGAAACTACCTCTCATAGGGAACCTGCATCAACTTGCAGGCTCATCACTTCCACACCAGGCTCTCAGAAAACTATCAAACAAACACGGTCCACTCATGCACCTTCAACTTGGTCAGATTTCATCAGTGATTGTCTCATCCCCCAACATGGCCAGAGAAATCATGAAGACTCATGATCTTGTATTTGCTGAAAGACCTGAGTTGCTTCCTTCCAAGATCTTAGCCTATGATTCAGCAGACATTGCATTCGCTCCCTATGGTGAATTCTGGAGGCAGATGAGGAAGATATGCACAGTTGAGCTTCTAAGTTCAAAGAAGGTTCAGTCTTTCGCCTATATCCGACAAGAGGAGGTAGCTAACATGCTAGAAACAATTCGCACATCCACCGGTGCAACCATCAATCTCAGTAAAATGATTAACAATATCATAAGCACTGTGGTTTCTAGAGCTATGTTTGGCAACTTATCTGAAGACCATGAAGAGTTTGTGTCCTTTGTGAAGGAGGCACTAGCTCTAGGCGATGGATTTGCCCTTGCGGATTTGTTTCCTTCTTTGAAACCTCTGCCTTTCATCACTGGTTTCGAAGCGAAACTGATGAAGATGCATGTCAAGATCGACAAGATCTTAGACAAGTTCATAAAGGAGATTGAAGCAAGGAAATTGGAAGATACACACCAAGAGCAAGAAGAAAAGAACGAGAATCTTGTTGAAGTTCTTTTAAGAGTCCTACATAGTGGCACCCTTGACATCCAAATTACAATGAACCATGTCAAAGCAGTCATTTGGGACATATTTGCTGCTGGAACAGATACTTCAGGAGTAGCTATAGAGTGGGTTATGTCGGAATTGATGAGAAGCCCTAGAGCTATGTGTTGCGGAAACGTAGATAATTTTCAATACAAATCAATCCTATGA 1032 0.4215 MEVSSSMVFIIISLLFLISVLLPWITNKGKGVHKLPPGPWKLPLIGNLHQLAGSSLPHQALRKLSNKHGPLMHLQLGQISSVIVSSPNMAREIMKTHDLVFAERPELLPSKILAYDSADIAFAPYGEFWRQMRKICTVELLSSKKVQSFAYIRQEEVANMLETIRTSTGATINLSKMINNIISTVVSRAMFGNLSEDHEEFVSFVKEALALGDGFALADLFPSLKPLPFITGFEAKLMKMHVKIDKILDKFIKEIEARKLEDTHQEQEEKNENLVEVLLRVLHSGTLDIQITMNHVKAVIWDIFAAGTDTSGVAIEWVMSELMRSPRAMCCGNVDNFQYKSIL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272037g00001 343 Coils Coil 257 277 - -
Stsc272037g00001 343 Pfam Cytochrome P450 36 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272037g00001 343 Gene3D Cytochrome P450 29 330 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272037g00001 343 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 11 329 - -
Stsc272037g00001 343 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272037g00001 343 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272037g00001 343 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272037g00001 343 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272037g00001 343 SUPERFAMILY Cytochrome P450 34 329 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272037g00001 Stsc-Chr272037 3472 4709 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272037g00001 6 334 Cytochrome P450 AT3G48320 35.882 2.90e-70 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272037g00001 - K15472 gmx:100800554 395.971