Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272036g00011 ATGGCTGAATCATTCATCTTCAGTATTGCTGAATCATTGGTAACGAAGCTTGCTTCTCGTGCATACCAAGAAGCTTCTCAGGTCATTGGTGTCTATGATGACCTCCAAGACTTGAAATCCAGTCTCTTGTATGTCAAAGCTGTGCTCTTGGATGCCGAGCAGAAGCAGGAGCTAGAGCACAACCATGAGCTCCGAGAATGGCTGAAGCAGATCAAACTCATCTTCTATGATGCTGAGAACGTGCTTGATCAAGTTGACTGCGAAACAATGCGCAAGCGAGTCCTCAGAGACTGTGGTACACCTAAAGACAAGGTAGGTGGCTTCTTCTCAAGTTCTAATCCACTTGTCTTTCGCTATAAGATTGCTCAAAAGATCAAAGAGATTAGGAAGAGATTAGACAAAGTTGCAGCTGATAGGGATAAGTTTGGTCTTCAAACAATTGCCTTTGATAAGCGAGTTGTGCATAGTAGGGAAACTTACTCCTATGTTGTTGAGTCTGATGTCATAGGAAGAGACCATGATAAAGAGAAGATCATGCAGCTCTTGATGGAGCCAAGTCATGACAACAATGGTGGCTCGGATCATATCTCTGTCATTCCCATTGTGGGAATTGGAGGTTTGGGAAAGACCACTCTTGCTAAGCTTGTCTTCAATGATGAAAGGATATCTGAGTCCTTTCCATTGAAAATGTGGGTGTGTGTGTCTGATGACTTTGATATCAAGCAATTGATTATTAAAATCATCAATGCTGTTTCTGTTAGTGATACTAGTTCTGCAGATGCTCTTGTGGTCCAACAAATCTTGAGAGACATGGACGTTGAACAATTGCAACATCTTCTTAGAAATAAGTTAGCCGGTAAAAAGTTCTTAGTTGTCTTGGACGATATCTGGAATGAAGATCGAGCCAAATGGATTGAACTTAGAAGTCTCATTAGAGCCTGTGGTGATGGGAGTAAAATTCTAGTCACAACACGGAGTCGTTCTATTGCTTCTATGATGGGTACTGTTCCTTTTCATGATTTAGAAGCCCTTTCTTTAGAAGATTCCTTATCTTTGTTCCTTAAATGGGCTTTTAAAGAAGGAGAAGAGGAAAAGCATCCTGATTTAGTCATGATTGGAAAAGATATTGTGACAAAGTGTAGAGGAGTTCCTTTAGCTGTAAGAACGCTGGCAAGTTTACTGTATTCAAAATATGAGATAAATGTCTGGGAATCAGTGAGAGATGATGAGATTTGGAATTTACCACAAAAAAAGGATGACATCTTACCTGCACTTAAATTAAGCTATGATCAAATGCCTTCCTATTTGAGGAAATGTTTTGCCATGTTCTCACTTTTCCCAAAGGATTTTGAATTTCATACTTATTACGTATCTTCGCTTTGGAGTGCACTAGGTTTGCTTCCATCACCAAGCAAAAACGAAACTTCACTAGATGTTGCAAACCGATGTCTGAATGAATTAATTTCAACATCTTTTGTTGAAATTGTTCGTGACTTAGGCATTTACTATTTCTTTAAAATGCATGATTTAGTGCATGATCTTGCACTATATGTTGCAAAAGATGAATGCCTCATGATCAATTCTGACAATCCAAATATACCAGAAAATGTTCTCCATCTATCGTTTATTGAATTTGATTTGTTCCTCAAATCCTTCAAACCAAGTTTGTTAGGTGTGAGAACTATTGTAGTTCCAACTGTACATAAAGATGAACATATGGGAACCAATAATGAGGATTTGTTCCCTACATGGGTGTTAAATTGCAAATACTTGCGATATTTGGATCTGACTGATTCTACATTTGAGATTCTACCTCTATCAATCAGCAAGTTGAAACATCTAAGATTTCTTTCACTCAAGAGGAATAGAAGAATAAGAAAACTCCCTGATTCTATTTGTAACCTCCAAAATTTGGAAGAGTTGAGTCTTGAAGGGTGCATGGAGCTCGAAACTTTGCCAAAAAAATTAAGAAACTTAATCAATCTGCGAAGAATAACCATAACCACTAAGCAATCTGTCTTGCCAGAGAGTGACATTGCAAGCTTGTGCTTGCTTGAAGATTTATATATCAATAATTGTGACAATCTGGAATCCCCGTTTGGAGGTGTAAAGTTGCTTGCTCTTCGATATTTGGGGATTTCCATGTGTAAGAATTTGAAGTCTTTGCCACTTGACATACACCATTTTCCTGAATTAGAGGATTTCAGTATTGCCAGATGTGATAATTTTGAATGGTCCAATGTACATGAGGATATGAACTCTGTCTTGAAGTTGAAGATACTTATATTTTGCATGGTGGTGAACATCCCTCTTTCTCTTCGGGCAAATGCAAACACATTACAAACTTTGGTATTTTTGGGCTGCTACGAGTTGGAGGCGCTTCCTGAATGGGTGTTAAATATTACTTCTTTGAAATTTCTTCATTTCCACAGCTGTCCAAAGTTGATGTCTCTCCCAAATGACATCCACCGTCTTAAAGCCCTTGAAGTTTTGCAAATAGAAGATTGTCCTATATTGTACAGAAAGTACCAGCCACAAGTTGGAGAGTATTGGCACCAAATATCCCACATCAAGCATAGTCGAATCATTAGATAG 2595 0.3838 MAESFIFSIAESLVTKLASRAYQEASQVIGVYDDLQDLKSSLLYVKAVLLDAEQKQELEHNHELREWLKQIKLIFYDAENVLDQVDCETMRKRVLRDCGTPKDKVGGFFSSSNPLVFRYKIAQKIKEIRKRLDKVAADRDKFGLQTIAFDKRVVHSRETYSYVVESDVIGRDHDKEKIMQLLMEPSHDNNGGSDHISVIPIVGIGGLGKTTLAKLVFNDERISESFPLKMWVCVSDDFDIKQLIIKIINAVSVSDTSSADALVVQQILRDMDVEQLQHLLRNKLAGKKFLVVLDDIWNEDRAKWIELRSLIRACGDGSKILVTTRSRSIASMMGTVPFHDLEALSLEDSLSLFLKWAFKEGEEEKHPDLVMIGKDIVTKCRGVPLAVRTLASLLYSKYEINVWESVRDDEIWNLPQKKDDILPALKLSYDQMPSYLRKCFAMFSLFPKDFEFHTYYVSSLWSALGLLPSPSKNETSLDVANRCLNELISTSFVEIVRDLGIYYFFKMHDLVHDLALYVAKDECLMINSDNPNIPENVLHLSFIEFDLFLKSFKPSLLGVRTIVVPTVHKDEHMGTNNEDLFPTWVLNCKYLRYLDLTDSTFEILPLSISKLKHLRFLSLKRNRRIRKLPDSICNLQNLEELSLEGCMELETLPKKLRNLINLRRITITTKQSVLPESDIASLCLLEDLYINNCDNLESPFGGVKLLALRYLGISMCKNLKSLPLDIHHFPELEDFSIARCDNFEWSNVHEDMNSVLKLKILIFCMVVNIPLSLRANANTLQTLVFLGCYELEALPEWVLNITSLKFLHFHSCPKLMSLPNDIHRLKALEVLQIEDCPILYRKYQPQVGEYWHQISHIKHSRIIR 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272036g00011 864 Gene3D Ribonuclease Inhibitor 761 845 IPR032675 -
Stsc272036g00011 864 PANTHER DISEASE RESISTANCE PROTEIN RP 49 836 IPR044974 GO:0006952
Stsc272036g00011 864 Gene3D - 10 126 - -
Stsc272036g00011 864 SUPERFAMILY L domain-like 506 842 - -
Stsc272036g00011 864 Gene3D - 154 336 IPR027417 -
Stsc272036g00011 864 Gene3D Ribonuclease Inhibitor 572 760 IPR032675 -
Stsc272036g00011 864 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 442 IPR027417 -
Stsc272036g00011 864 CDD RX-CC_like 2 136 IPR038005 -
Stsc272036g00011 864 Pfam Rx N-terminal domain 11 99 IPR041118 -
Stsc272036g00011 864 Pfam NB-ARC domain 173 430 IPR002182 GO:0043531
Stsc272036g00011 864 PRINTS Disease resistance protein signature 380 394 - -
Stsc272036g00011 864 PRINTS Disease resistance protein signature 633 649 - -
Stsc272036g00011 864 PRINTS Disease resistance protein signature 198 213 - -
Stsc272036g00011 864 PRINTS Disease resistance protein signature 283 297 - -
Stsc272036g00011 864 Gene3D - 428 517 IPR036388 -
Stsc272036g00011 864 Gene3D - 343 427 IPR042197 -
Stsc272036g00011 864 FunFam Probable disease resistance protein At1g61300 151 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272036g00011 Stsc-Chr272036 49452 52243 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272036g00011 196 825 WRKY Transcription Factor Family AT5G45050 21.948 3.13e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272036g00011 - - gmx:100786131 974.156