Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272036g00008 ATGATCTTGCATTATATGTTGCAAAAAGATGAATGCCTAATGATCAGTTCTGAGGATCCAAATATACCAGAAAATGTTCTCCATCTATCCTTTATTGAATTTGATTTGTTCCTCGAATCCTTCAAACCAGGTTTGTTAGGTGTGAGAGCTATTGTAATTCCATTTAGCTTCACGGATGAACATAAGGGAGCCAATAATGGGAATTTGTTCCATATATGGGTGTTAAATTGCAAATACTTGCGATATTTGGATCTGAGTGGTTCTACGTTTGAGATTCTACCTCGATCAATCAAAAAGTTGAAACATTTAAGATATCTTGCACTCATGAATAACAGAAGAATAAGGAAACTCCCTGATTCTATTTGTAACCTCCAAAATTTGGAAGAGTTGATTCTTTTTGGGTGTGAGGAGCTTGAAACTCTGCCAAAAAAATTAAGAAAGTTAATCAATCTGCAAAGAATGTCCATAACCACAAAGCAATCTGTCTTGCCAGAGAGTGACATTGCAAGCTTGTGCTTCCTTGAAGAATTAAATATTGGTGACTGTGACAATCTAGAATCCCTGTTCGGAGGCGTAAAGTTGCCTGCTCTTCGATTTTTACGGATTATGGACTGTAAGAATTTGAAGTGTTTGCCACTTGACATACACCATTTTCCTCAATTAGAGGATCTCTGTATCGCCGATTGTGAGAATTTTGAATGGCCCGGTGTACATGAGGACATGAACTCTGTCTTGAAGTTGAAGTTACTTCTCTTTAGCATGGTGAACGTCCCTCATTCTCTCCTGGCATATGCAAACACATTACAAACTTTGGTGTTTATAGAGTGCTACGAGCTTGAGGAGCTTCCTGAAGGGGTGTTAAATATGACTTGTTTGAAAACTCTTAATATCCTCGGCTGTCCAAAGTTGATGTCTCTCCCAAATGGCATCCACGGTCTTAAAGCCCTTGAAGTTTTGGTAATCGAAGATTGCCCTATATTGTACAGCAAGTACCAGCCACAAGTTGGAGAGTATTGGCACCAAATATCTCACATCAAGCATACTCTTATCAATCCATAG 1059 0.3862 MILHYMLQKDECLMISSEDPNIPENVLHLSFIEFDLFLESFKPGLLGVRAIVIPFSFTDEHKGANNGNLFHIWVLNCKYLRYLDLSGSTFEILPRSIKKLKHLRYLALMNNRRIRKLPDSICNLQNLEELILFGCEELETLPKKLRKLINLQRMSITTKQSVLPESDIASLCFLEELNIGDCDNLESLFGGVKLPALRFLRIMDCKNLKCLPLDIHHFPQLEDLCIADCENFEWPGVHEDMNSVLKLKLLLFSMVNVPHSLLAYANTLQTLVFIECYELEELPEGVLNMTCLKTLNILGCPKLMSLPNGIHGLKALEVLVIEDCPILYSKYQPQVGEYWHQISHIKHTLINP 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272036g00008 352 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 67 158 - -
Stsc272036g00008 352 Gene3D Ribonuclease Inhibitor 251 348 IPR032675 -
Stsc272036g00008 352 SUPERFAMILY L domain-like 12 331 - -
Stsc272036g00008 352 Gene3D Ribonuclease Inhibitor 62 250 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272036g00008 Stsc-Chr272036 37581 38639 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272036g00008 80 177 WRKY Transcription Factor Family AT4G12020 37.374 4.96e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272036g00008 - - aip:110262460 331.257