Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272033g00005 ATGCTCTTCATTATCAGAGGTAGATTGGATAGTTCTACTACAAATGGTGGTCGGACTGGTTTCTTCAACTCAATCATATTGAGGCCTGGGGATTTTTGTGGTGAGGAACTCCTTTCTTGGGCATTACTACCAAGATCAACCACAAACTTACCGTCCTCAACTAGGACTGTTAAAGCCCTAAGCGAGGTGGAAGCTTTTGCTCTTCGAGCTGAGGACCTCAAGTTTGTAGCTAATCAGTTTAGGCGCCTCCACAGTAAGAAGCTGCAGCACACCTTCCGATTTTACTCCCACCACTGGAGAACTTGGGCAGCCTGCTTTATTCAGGCTGCCTGGCGACGGTATAAGAAAAGAATGTCTGCTAAAGACCTCAGTTTGAGGGAATGCATTCCTTTAGATGAGACAGTGGCTAGTGAGAGAGAAGACAATGACTTGGAATACCCTGCTGGCTCAAATTCATCTCAAGCCAAATTGAACCTTGGGGTCACAATACTTGCTTCAAGGTTCGCCGCCAACACAAGAAGAGGTGCTTTGAAGATAAAAGATGACCTACCTAAGTTACCGAAACCTGAAGAACCTGACTTTTCTACCGAAGCTGACGATTAA 603 0.4544 MLFIIRGRLDSSTTNGGRTGFFNSIILRPGDFCGEELLSWALLPRSTTNLPSSTRTVKALSEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKKRMSAKDLSLRECIPLDETVASEREDNDLEYPAGSNSSQAKLNLGVTILASRFAANTRRGALKIKDDLPKLPKPEEPDFSTEADD 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272033g00005 200 MobiDBLite consensus disorder prediction 180 200 - -
Stsc272033g00005 200 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 194 - -
Stsc272033g00005 200 CDD CAP_ED 1 95 IPR000595 -
Stsc272033g00005 200 Gene3D Jelly Rolls 1 82 IPR014710 -
Stsc272033g00005 200 SUPERFAMILY cAMP-binding domain-like 1 82 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272033g00005 Stsc-Chr272033 23888 24490 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272033g00005 1 200 Ion Channels AT4G30360 73.892 2.45e-97 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272033g00005 K05391 - gmx:100810967 350.517