Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272032g00001 ATGGGACAAGAATCAGATTACAAAACCCAACTGGTATTGAAGATTTGCTCAATTTCCACACGTTCTGATGTTTGTGTTCATAGACTTGTCCCTAACAAAACCAATAAGCCACCTTTCATTGATTGGTACTGCATTCTTGGAGTGGCAGGAAATGCGGATGTAAATACAATTCGCAAGCAATACCATAAACTTGCTTTGCAACTTCATCCAGATAAGAATAAACACCCCAAGGCTGAAATTGCATTCAAGCTTCTATCAGAGGCATATGCATGTTTATCTGATGCAGCAAAAAGGAAAGCATTTAACTTGGAGAGAAGCAAGAGCTTATGCATTGAGTGCAACAGAGTCCCTTATAATGGATCTTCTTCTTCTTCTTCTTCTTCAAGTTTCAAATCATCAAGGAGTAATGGTGGTGTCAGCAGTAGTTCAAGATCATGTAAGCTTTGGAGAAACATTCAGGACATAAGAGAAAGATTAAGGGAAGAGGCTAAGGTGATAGAGAATTGTTTAAGGGTGAATAATTCAGTGCCAACAAAGAATTATGATGATGATGATAATCATAAGGCTAGAGTACTTGAGAAAGAAACACCAGTTTTCAATCCCTCAAATTACTTGTACCAAGGATACCCTCATAGGAGAAATAATCATGTTAACAAGGATTGTTACTCTGAGAATTTTTGGTACTTGCAGCAAAAAACTAATGCAGGATCAGATAACTTTGCTTCACCAGTTTTTGAGGTTGAAACACAGAGGAGCATGTTCAGTAGAAAATTTGCTCCTATTCCTTCACAATGTTAG 798 0.3747 MGQESDYKTQLVLKICSISTRSDVCVHRLVPNKTNKPPFIDWYCILGVAGNADVNTIRKQYHKLALQLHPDKNKHPKAEIAFKLLSEAYACLSDAAKRKAFNLERSKSLCIECNRVPYNGSSSSSSSSSFKSSRSNGGVSSSSRSCKLWRNIQDIRERLREEAKVIENCLRVNNSVPTKNYDDDDNHKARVLEKETPVFNPSNYLYQGYPHRRNNHVNKDCYSENFWYLQQKTNAGSDNFASPVFEVETQRSMFSRKFAPIPSQC 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272032g00001 265 ProSitePatterns Nt-dnaJ domain signature. 82 101 IPR018253 -
Stsc272032g00001 265 CDD DnaJ 41 94 IPR001623 -
Stsc272032g00001 265 SUPERFAMILY Chaperone J-domain 36 103 IPR036869 -
Stsc272032g00001 265 PANTHER BNAC03G44070D PROTEIN 25 251 - -
Stsc272032g00001 265 PRINTS DnaJ domain signature 43 61 IPR001623 -
Stsc272032g00001 265 PRINTS DnaJ domain signature 77 97 IPR001623 -
Stsc272032g00001 265 PRINTS DnaJ domain signature 61 76 IPR001623 -
Stsc272032g00001 265 Pfam DnaJ domain 41 102 IPR001623 -
Stsc272032g00001 265 MobiDBLite consensus disorder prediction 119 143 - -
Stsc272032g00001 265 SMART dnaj_3 40 97 IPR001623 -
Stsc272032g00001 265 Gene3D DnaJ domain 40 164 IPR036869 -
Stsc272032g00001 265 ProSiteProfiles dnaJ domain profile. 41 105 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272032g00001 Stsc-Chr272032 4068 5168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272032g00001 1 102 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.075 1.62e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272032g00001 - - adu:107483537 436.417