Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272029g00006 ATGTCATTTACATCAAATAATGTTAGTATTTCAGGGTCATCAGTTATGGATGGTTCCAGTGTAGTACAGCAGAGCTCTCACCAAGATCAGAATGTTCAACCATTGCAGCAGAATCAGCAGCATGGTGCTTCTAGTGCTATGTCTATACCTGGGTCTCAAACTGCCCCTTCTCCGCTTCCAATGGGTGCACAAATACCAGGGTCTTTCATGCAAGATACAAATAATTTGTCCCAGCTGTCCAAAAAACCTAGGCTGGATATCAAGCAGGAGGATTTAATGCAACAGCAGGTTATACAACAACTTCTTCAACGGCAGGACCCTATGCAATACCAGGGTCGTAATCCACAGATACAAGCTTTGATTCAGCAGCAGCAAAGACTGAGGCAACAACATATCCTTCAGTCAATGCCACAGTTACAGCGAGCGCACTTGCAGCAGCAACAACAGCAGCAGCAGCAACAACAACAACAACAGATGCATTTGAGGCAGCAGCAATTACAGCAACAATCAATGCAATCCGCAGTAAAGCGACCATACGACAGTAGCGTTAATGGTGTCTGTGCTCGTAGATTGATGCAATACCTCTATCATCAAAGGCAACGACCAAGTGAAAACACTATTGCCTATTGGAGAAAATTTGTGGCTGAGTATTACTCTCCTCGAGCAAAGGAACGGTGGTGCTTGTCTTTGTATAATAATGTTGGGCATCATGCACTCGGTGTTTTCCCTCAGGCATCTATGGATGCATGGCAGTGCGACATATGTGGTTCTAAATCTGGAAGGGGATTTGAGGCAACTTTTGAAGTACTCCCTAGACTTAATGACATCAAATTTGGCAGTGGAGTGATTGATGAACTTCTGTTTTTGGAATTGCCACGCGAACAAAGATTTCCTTCTGGTTTGATGATGTTAGAATATGCAAAAGCAGTTCAAGAGAGCGTATACGAGCAACTTCGTGTTGTTCGTGAGGGTCACCTACGTATTATATTTACGCAAGACCTTAAGATATTATCTTGGGAGTTCTGTGCAAGGCGCCATGAAGAACTTCTTCCTAGAAGGTTGGTTGCACCACAGGTAAACCAGTTGGTTCAAGTAGCTCAAAAATGTCAGAGTACAATTGCTGAAAGTGGTTCAGATGGGGTTTCTCAGCAAGATTTGCAAGCAAACAGCAATATGGTATTGGCTGCTGGGCGTCAACTTGCAAAAAGTCTGGAGTTGCAGTCGTTGAATGACTTAGGTTTTTCCAAAAGATATATATCTGAGGTTGTCAATTCCATGAAAGATCTGATAGATATCTGTCGGGAGCACAAAATTGGGGCAATTGAGAGCTTGAAAAATTACCCTCGCTTTGCAACCGCCGCTAAGCTCCAGATGCAAAAAATGCATGAGATGGAACAGCTAGCAAATGTTCAAGGTCTGCCAACTGATCGAAACACAATTAACAAACTAATGGCAATGAATCCTAGTTTGAACAACCCAATTAATAATAACCATAATATGATAAATCGTGGTGCTTTGAGTGGGTCAGCACAAGCTGCTATGGCACTGACTAACTACCAGAATATTCTCATGAGGCAAAACTCGATGAATTCGAGCCCTGGCTCAATTCAGCGAGAAGGATCATCATCTTTCAATAATGCGAACCAGAGTCCTTCTTCAGCTATGCAAGGTGCTGCCGCTGCTTTTATTCCAGGCTCGATGCAGAACTCACCCGTTAGTGGTTTCCCAAGTCCCCATCTGCCCCCTCAGCAGCAACAGCAACAGCAGCAACAACACCTTCAACAGCGATCATTAAGTGCAAATAGCTTCTTGCAACAAAACCATTCACAGGGTTCCCAAGGAAATCAAGCTCTACAGCAGCAGATGATCCAGCAACTGCTTATGTCTAATAACAATGGGGGAGTACAATCACAATCTCTTAGTGGACCCAATGCAAATGGGAGCATAGCAAAGAATGGGATGGGTTTCGGAGGTCATTCTCCGTCTCCTTCCATAACTGGAGGATCTGTCAATGTTTCAGGTAACAAAGGCCCGGTTTCAAGGAGTAATAGCTTCAAATCGGCCTCAAACAGTGATTCTTCTCCGGCTGGTGGCAACAATGGATTCAACCAGAGAGCATCAGATATGCCACAGAATCTCCATTTACAAGATGTGGTTCCGGATATTGGCAGTGATTTTACAGATAGTCCCTTCTTCAGTAGTGATCTGGATGATAACATGGGTTTTGGCTGGAAGGCATGA 2241 0.4391 MSFTSNNVSISGSSVMDGSSVVQQSSHQDQNVQPLQQNQQHGASSAMSIPGSQTAPSPLPMGAQIPGSFMQDTNNLSQLSKKPRLDIKQEDLMQQQVIQQLLQRQDPMQYQGRNPQIQALIQQQQRLRQQHILQSMPQLQRAHLQQQQQQQQQQQQQQMHLRQQQLQQQSMQSAVKRPYDSSVNGVCARRLMQYLYHQRQRPSENTIAYWRKFVAEYYSPRAKERWCLSLYNNVGHHALGVFPQASMDAWQCDICGSKSGRGFEATFEVLPRLNDIKFGSGVIDELLFLELPREQRFPSGLMMLEYAKAVQESVYEQLRVVREGHLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAESGSDGVSQQDLQANSNMVLAAGRQLAKSLELQSLNDLGFSKRYISEVVNSMKDLIDICREHKIGAIESLKNYPRFATAAKLQMQKMHEMEQLANVQGLPTDRNTINKLMAMNPSLNNPINNNHNMINRGALSGSAQAAMALTNYQNILMRQNSMNSSPGSIQREGSSSFNNANQSPSSAMQGAAAAFIPGSMQNSPVSGFPSPHLPPQQQQQQQQQHLQQRSLSANSFLQQNHSQGSQGNQALQQQMIQQLLMSNNNGGVQSQSLSGPNANGSIAKNGMGFGGHSPSPSITGGSVNVSGNKGPVSRSNSFKSASNSDSSPAGGNNGFNQRASDMPQNLHLQDVVPDIGSDFTDSPFFSSDLDDNMGFGWKA 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272029g00006 746 MobiDBLite consensus disorder prediction 1 74 - -
Stsc272029g00006 746 Pfam LIM-domain binding protein 190 445 IPR029005 -
Stsc272029g00006 746 MobiDBLite consensus disorder prediction 527 597 - -
Stsc272029g00006 746 PANTHER LIM DOMAIN-BINDING PROTEIN 1 728 IPR029005 -
Stsc272029g00006 746 MobiDBLite consensus disorder prediction 527 556 - -
Stsc272029g00006 746 MobiDBLite consensus disorder prediction 631 648 - -
Stsc272029g00006 746 MobiDBLite consensus disorder prediction 1 59 - -
Stsc272029g00006 746 MobiDBLite consensus disorder prediction 566 597 - -
Stsc272029g00006 746 MobiDBLite consensus disorder prediction 631 717 - -
Stsc272029g00006 746 Coils Coil 144 164 - -
Stsc272029g00006 746 MobiDBLite consensus disorder prediction 662 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272029g00006 Stsc-Chr272029 59664 63942 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272029g00006 185 449 C2H2 Transcription Factor Family AT1G43850 58.519 4.88e-102 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272029g00006 - - gmx:100816886 1047.73