Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272029g00005 ATGAATAATGCAGTTTTGAACAATGTGGCAAACTCAGCACCAAGTGTTGGAGCCAGCTCTTTAGTCACAGATGCAAATTCAGCATTCTCTGGTGGGCCCCATTTGCAGAGAAGTGCAAGCATTAACCCAGACTCATACTTACGTTTACCTGCTTCGCCCATGTCATTTACATCAAATAATGTTAGTATTTCAGGGTCATCAGTTATGGATGGTTCCAGTGTAGTACAGCAGAGCTCTCACCAAGATCAGAATGTTCAACCATTGCAGCAGAATCAGCAGCATGGTGCTTCTAGTGCTATGTCTATACCTGGGTCTCAAACTGCCCCTTCTCCGCTTCCAATGGGTGCACAAATACCAGGGTCTTTCATGCAAGATACAAATAATTTGTCCCAGCTGTCCAAAAAACCTAGGCTGGATATCAAGCAGGAGGATTTAATGCAACAGCAGGTTATACAACAACTTCTTCAACGGCAGGACCCTATGCAATACCAGGGTCGTAATCCACAGATACAAGCTTTGATTCAGCAGCAGCAAAGACTGAGGCAACAACATATCCTTCAGTCAATGCCACAGTTACAGCGAGCGCACTTGCAGCAGCAACAACAGCAGCAGCAGCAACAACAACAACAACAGATGCATTTGAGGCAGCAGCAATTACAGCAACAATCAATGCAATCCGCAGTAAAGCGACCATACGACAGTAGCGTTAATGGTGTCTGTGCTCGTAGATTGATGCAATACCTCTATCATCAAAGGCAACGACCAAGTGAAAACACTATTGCCTATTGGAGAAAATTTGTGGCTGAGTATTACTCTCCTCGAGCAAAGGAACGGTGGTGCTTGTCTTTGTATAATAATGTTGGGCATCATGCACTCGGTGTTTTCCCTCAGGCATCTATGGATGCATGGCAGTGCGACATATGTGGTTCTAAATCTGGAAGGGGATTTGAGGCAACTTTTGAAGTACTCCCTAGACTTAATGACATCAAATTTGGCAGTGGAGTGATTGATGAACTTCTGTTTTTGGAATTGCCACGCGAACAAAGATTTCCTTCTGGTTTGATGATGTTAGAATATGCAAAAGCAGTTCAAGAGAGCGTATACGAGCAACTTCGTGTTGTTCGTGAGGGTCACCTACGTATTATATTTACGCAAGACCTTAAGATATTATCTTGGGAGTTCTGTGCAAGGCGCCATGAAGAACTTCTTCCTAGAAGGTTGGTTGCACCACAGGTAAACCAGTTGGTTCAAGTAGCTCAAAAATGTCAGAGTACAATTGCTGAAAGTGGTTCAGATGGGGTTTCTCAGCAAGATTTGCAAGCAAACAGCAATATGGTATTGGCTGCTGGGCGTCAACTTGCAAAAAGTCTGGAGTTGCAGTCGTTGAATGACTTAGGTTTTTCCAAAAGATATGTAAGATGTTTGCAGATATCTGAGGTTGTCAATTCCATGAAAGATCTGATAGATATCTGTCGGGAGCACAAAATTGGGGCAATTGAGAGCTTGAAAAATTACCCTCGCTTTGCAACCGCCGCTAAGCTCCAGATGCAAAAAATGCATGAGATGGAACAGCTAGCAAATGTTCAAGGTCTGCCAACTGATCGAAACACAATTAACAAACTAATGGCAATGAATCCTAGTTTGAACAACCCAATTAATAATAACCATAATATGATAAATCGTGGTGCTTTGAGTGGGTCAGCACAAGCTGCTATGGCACTGACTAACTACCAGAATATTCTCATGAGGCAAAACTCGATGAATTCGAGCCCTGGCTCAATTCAGCGAGAAGGATCATCATCTTTCAATAATGCGAACCAGAGTCCTTCTTCAGCTATGCAAGGTGCTGCCGCTGCTTTTATTCCAGGCTCGATGCAGAACTCACCCGTTAGTGGTTTCCCAAGTCCCCATCTGCCCCCTCAGCAGCAACAGCAACAGCAGCAACAACACCTTCAACAGCGATCATTAAGTGCAAATAGCTTCTTGCAACAAAACCATTCACAGGGTTCCCAAGGAAATCAAGCTCTACAGCAGCAGATGATCCAGCAACTGCTTATGTCTAATAACAATGGGGGAGTACAATCACAATCTCTTAGTGGACCCAATGCAAATGGGAGCATAGCAAAGAATGGGATGGGTTTCGGAGGTCATTCTCCGTCTCCTTCCATAACTGGAGGATCTGTCAATGTTTCAGGTAACAAAGGCCCGGTTTCAAGGAGTAATAGCTTCAAATCGGCCTCAAACAGTGATTCTTCTCCGGCTGGTGGCAACAATGGATTCAACCAGAGAGCATCAGATATGCCACAGAATCTCCATTTACAAGATGTGGTTCCGGATATTGGCAGTGATTTTACAGATAGTCCCTTCTTCAGTAGTGATCTGGATGATAACATGGGTTTTGGCTGGAAGGCATGA 2415 0.4402 MNNAVLNNVANSAPSVGASSLVTDANSAFSGGPHLQRSASINPDSYLRLPASPMSFTSNNVSISGSSVMDGSSVVQQSSHQDQNVQPLQQNQQHGASSAMSIPGSQTAPSPLPMGAQIPGSFMQDTNNLSQLSKKPRLDIKQEDLMQQQVIQQLLQRQDPMQYQGRNPQIQALIQQQQRLRQQHILQSMPQLQRAHLQQQQQQQQQQQQQQMHLRQQQLQQQSMQSAVKRPYDSSVNGVCARRLMQYLYHQRQRPSENTIAYWRKFVAEYYSPRAKERWCLSLYNNVGHHALGVFPQASMDAWQCDICGSKSGRGFEATFEVLPRLNDIKFGSGVIDELLFLELPREQRFPSGLMMLEYAKAVQESVYEQLRVVREGHLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAESGSDGVSQQDLQANSNMVLAAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDICREHKIGAIESLKNYPRFATAAKLQMQKMHEMEQLANVQGLPTDRNTINKLMAMNPSLNNPINNNHNMINRGALSGSAQAAMALTNYQNILMRQNSMNSSPGSIQREGSSSFNNANQSPSSAMQGAAAAFIPGSMQNSPVSGFPSPHLPPQQQQQQQQQHLQQRSLSANSFLQQNHSQGSQGNQALQQQMIQQLLMSNNNGGVQSQSLSGPNANGSIAKNGMGFGGHSPSPSITGGSVNVSGNKGPVSRSNSFKSASNSDSSPAGGNNGFNQRASDMPQNLHLQDVVPDIGSDFTDSPFFSSDLDDNMGFGWKA 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272029g00005 804 MobiDBLite consensus disorder prediction 720 769 - -
Stsc272029g00005 804 MobiDBLite consensus disorder prediction 585 614 - -
Stsc272029g00005 804 MobiDBLite consensus disorder prediction 624 655 - -
Stsc272029g00005 804 MobiDBLite consensus disorder prediction 585 655 - -
Stsc272029g00005 804 MobiDBLite consensus disorder prediction 689 775 - -
Stsc272029g00005 804 MobiDBLite consensus disorder prediction 67 112 - -
Stsc272029g00005 804 PANTHER LIM DOMAIN-BINDING PROTEIN 10 786 IPR029005 -
Stsc272029g00005 804 MobiDBLite consensus disorder prediction 689 706 - -
Stsc272029g00005 804 Pfam LIM-domain binding protein 243 503 IPR029005 -
Stsc272029g00005 804 Coils Coil 197 217 - -
Stsc272029g00005 804 MobiDBLite consensus disorder prediction 67 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272029g00005 Stsc-Chr272029 59537 63942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272029g00005 238 507 C2H2 Transcription Factor Family AT1G43850 60.370 4.30e-108 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272029g00005 - - gmx:100816886 1151.35