Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272027g00015 ATGTTCTTATCAAACATAGACAAAGTCCTAAACTTCGATGTGGAAACGGTTCATTTTTTCGTGGCGAACAAGGATTATCCCCCGACAAAGGTGGCAGAGAAGCTCAAGGGCGCCCTAGAAGATGCCCTTGGGGCTTACGAGTTCTTGGGAGGGAGACTGAGGCTGAACTCCGAAACCGGAAGGTTAGAGGTGGATTGCAATGGAGAAGGTGCTGGGTTTGTGGTGGCTTCAAGTGAGTACAGATTGGATGAGATTGGAGACTTGGTTTATCCAAACCCAGCATTTTCACAATTTGTTCATAAGACTAAGGATTTCCTCAAACATGGTGATTCTCCACTATGTGTTGCCCAG 351 0.4644 MFLSNIDKVLNFDVETVHFFVANKDYPPTKVAEKLKGALEDALGAYEFLGGRLRLNSETGRLEVDCNGEGAGFVVASSEYRLDEIGDLVYPNPAFSQFVHKTKDFLKHGDSPLCVAQ 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272027g00015 117 Pfam Transferase family 1 116 - -
Stsc272027g00015 117 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 117 - -
Stsc272027g00015 117 Gene3D - 1 117 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272027g00015 Stsc-Chr272027 82720 83070 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272027g00015 4 117 Monolignol Biosynthesis Gene Families AT5G48930 32.500 5.05e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272027g00015 K13065 - gmx:100780971 187.963