Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc272023g00002 | ATGAAACTCGACTCCACTAATGGCGACGCCAAACCCTCCGGATCTTTCACTGAAGGCGGTGGCGCTGCTGACGATGACGACGTCCTCGTGCCTCCGTTGAACTTCGCCGTCGTGGATAACGGCATTTTCCGCTCTGGTTTTCCCGAGCCCGCCAATTTCGGGTTTCTGAAATCGCTCCACCTTCGTTCCGTTATATGTTTGTGCCCCGAACCCTATCCGGAACACAATTCAGAGTTTCTCAAGGCTAATGGAATTAGGCTTTTCCAATTCGGGATCGATGGCTGTAAGGAACCCTTTGTCAACATCCCAGAGGATACTATTCGAGAAGCTTTGAAAGTACTCCTTGATGTTAGGAACCACCCTGTGTTAATTCATTGTAAACGAGGGAAGCACCGCACTGGTTGTTTGGTGGGATGCTTAAGAAGATTGCAGAGGTGGTGTTTGTCATCTGTTTTTGACGAGTACCAAAGGTTTGCAGCAGCGAAAGCCAGAGTGTCAGACCAGAGGTTCATAGAATTATTCGACATTTCTTGTTTGAAGCACTACCCATTATCATTTTCATGCTCAAGGAAATAG | 576 | 0.4757 | MKLDSTNGDAKPSGSFTEGGGAADDDDVLVPPLNFAVVDNGIFRSGFPEPANFGFLKSLHLRSVICLCPEPYPEHNSEFLKANGIRLFQFGIDGCKEPFVNIPEDTIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRRLQRWCLSSVFDEYQRFAAAKARVSDQRFIELFDISCLKHYPLSFSCSRK | 191 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc272023g00002 | 191 | Pfam | Tyrosine phosphatase family | 29 | 181 | IPR004861 | - | |
Stsc272023g00002 | 191 | PANTHER | TYROSINE-PROTEIN PHOSPHATASE | 27 | 180 | - | - | |
Stsc272023g00002 | 191 | FunFam | probable tyrosine-protein phosphatase At1g05000 | 28 | 178 | - | - | |
Stsc272023g00002 | 191 | PRINTS | Plant and fungal dual specificity phosphatase signature | 29 | 46 | IPR020428 | GO:0016791 | |
Stsc272023g00002 | 191 | PRINTS | Plant and fungal dual specificity phosphatase signature | 66 | 79 | IPR020428 | GO:0016791 | |
Stsc272023g00002 | 191 | PRINTS | Plant and fungal dual specificity phosphatase signature | 102 | 116 | IPR020428 | GO:0016791 | |
Stsc272023g00002 | 191 | PRINTS | Plant and fungal dual specificity phosphatase signature | 85 | 99 | IPR020428 | GO:0016791 | |
Stsc272023g00002 | 191 | CDD | PFA-DSP_Siw14 | 29 | 175 | - | - | |
Stsc272023g00002 | 191 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 29 | 176 | IPR029021 | - | |
Stsc272023g00002 | 191 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 34 | 188 | IPR020422 | GO:0006470|GO:0008138 | |
Stsc272023g00002 | 191 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 124 | 134 | IPR016130 | GO:0016311|GO:0016791 | |
Stsc272023g00002 | 191 | Gene3D | Protein tyrosine phosphatase superfamily | 28 | 178 | IPR029021 | - | |
Stsc272023g00002 | 191 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc272023g00002 | Stsc-Chr272023 | 17781 | 20311 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc272023g00002 | 1 | 191 | Protein tyrosine phosphatase (PTP) family | AT4G03960 | 69.744 | 4.75e-100 | 285 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc272023g00002 | K18045 | - | gmx:100785520 | 327.791 |