Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272021g00005 ATGAACTTCTCCATCACCGTCAAGGCCTTTTCTACACCTGTCCTTACCCAAGACAACCTTAACAAGCTTGCCACCAACAAGGTCGTGGAGTACGTCAAGTCCGGCATGGTGTTCGGCCTCGGTACCGGCTCCACCGTTGCCTTCGTCGTTGTCAAGCTTGGCAAAAGAATCTACAAGATTGATTTATTGCGTAACCTGATCTCGTTCTCGCAAGTGCTCAAGATTGGGATCAAAGCGCTATTCACACTGTGCCTAGTGAATCAGACACGGCACAAAGCAGTGGTAGCGGGTGCCCTGGCGGTTTTCATCAACAAGCTCACCGATTTCGAGAAGCGTGGCTTTGAGAAAGCACTGGTAACGGTGGCGCTCCTCTCCGAGTTCTGGAGAGGTGTGCGGCGTTCGCTAAACATGCGCTGA 417 0.5204 MNFSITVKAFSTPVLTQDNLNKLATNKVVEYVKSGMVFGLGTGSTVAFVVVKLGKRIYKIDLLRNLISFSQVLKIGIKALFTLCLVNQTRHKAVVAGALAVFINKLTDFEKRGFEKALVTVALLSEFWRGVRRSLNMR 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272021g00005 138 SUPERFAMILY NagB/RpiA/CoA transferase-like 17 76 IPR037171 -
Stsc272021g00005 138 PANTHER RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED 11 59 - -
Stsc272021g00005 138 Gene3D - 10 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272021g00005 Stsc-Chr272021 31874 32290 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272021g00005 60 130 U-box Gene Family AT1G49780 51.389 8.71e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272021g00005 - K01807 var:108341190 83.9593