Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272020g00008 ATGAAGAATCTTGTGGGGATTGAATCAAGAGTGGAACAAGTGATTAGTCAAATAGGCCTTGGACTGAATGATGTTCGCTATATAGGCATATGGGGATTGGGCGGCATAGGGAAGACTACTATTGCTAGGGCAGTCTTTGAAACCATTCAAAATAGATTTGAAGTTTCTTGCTTTCTTGCCGATGTGAGGCATTATTCTGGGGATATTACTAGATTACAAAACGAACTTCTCAAACAAATAAGTCCAAATGCTGATTATAACAAGTTTGATGGGAGCAAAAAAATTCAAACCTCTTTCCGTAACAGAAAGGTACTTATTGTTCTTGATGATGTAAGCCATGAAAATCAACTAGAGAATTTGGCCAATGAAAAAGATTGGTTTGGTCCCGGAAGCAGAATAATAATTACAACTAGAAACAAAGAGGTGCTAAAGCAACAAGAGGGGCATGGAACTTATGAGGTTAAAGAGTTAGTGGAAAGTGAAGCCATTAACCTGTTTTGTTCGAAAGCTTTCAATCGGCCGGAACCTATAGTAGGGTTTTTGAATTTGTCTAAGGAAGTGGGGAATTATAGTGGTGGTCTTCCATTGGCACTTAAAGTATTAGGATGGGGGAAAGATGAAGTAACAAAGATATTAGAAGAATGTGGTTATGATGCTGAAATTGGTATTGATATTTTGGCTAATAGATCATTGATCACATTAGAGCAAAGGAGGCATGAAGGTACTGTTGTGGGAATGCATGATCTGCTTCAAGAAATGGGCAAACAAATTGTAATTCAAGAATCTCCCAAAGATGCTAGTAAGCGTAGCAGATCGTGGTGTTACAAGGATATTGAGTCTCTACTTTCTCAAAAGCAGCAACTCAAAGCATGGTTCTACGGTAAGCCCTGGACGGATACTGAAGAGAATTGGAGAGATTTGGATATAAGAGGTTCATGTTTCTCAAAGCTACAGCTTCTTATTTTAGATGGCGTGACAGCTCCCATTCTCTACAATATTCCTTGTACATTAAAGGTTTTGCGCTGGAGCAATTGTCCAATGGAAACTCTGCCCTTAAGAGATCAACGCTATGAACTTGTTGAAATTGATCTGTCTGAGAGCGAAATTGTACAATTATGGGAGGGAAAGAAGTTTCTATATAAGTTGGAGCACTTGGATCTGTTCTGCTGCAATAAGCTAAAGGAAGTACCGGATCTTTCTGGGGCTCCCAATCTTAAAACACTTACTATTAGATATTGTGTTGAGCTGAATTATATTCATCCGTCTCTTACACACCACAAGAGCCTTGTTGAATTGAATTTAAGGGAATGTAATTGTCTTGAAACACTTGGAGATAAATTGGAGATGAGTTCACTGAAGCAACTAGATCTACAGGGTTGCGACAGTTTGAGCAGAGTGCCAGAATTTGGGGAATGCATGAAACAGTTATCGATTCTTAATTTGCCTCTTGGAGACATAGAAGAGCTACCCAGTACGTTTGGAAATTTGGTTGGCCTCACTGAGTTATACTTAGATGTATGGGGGTATATTGATCATCCCATATCACTTGGATGTTTCCTTTGCCTCAAGTCCCTCACAATTACGGCTTTCCATCAAATCCAAATCCAAAATATAGATAGACTTTTGACTTCTGTCTCTCTTCTAACCTCTTTGACTAGTCTCACATTAATTAATTGTTTTCCCAAATCTCAAGAGTCCATCCCTTACTGTGATCTTGCCCACTTAGCGTTCTTGACGGATTTGTATTTATCGTACAACCATTTTAAAATGGTTCCGATAAGTATCCATCAACTCCCCAGACTTACACAGCTGCAGCTAAATAATTGCTCTGAATTGGAGGTTTTGCCAGATCTTCCATCAAGTCTAAGACTATTACAAGCAATTGGTTGTTATTCACTAGATGCATCCAATGTGAATGATGTAATATCAAAGGCGTGTTGTGTCTTCGCAGAATCAACTAGCCAAGATGGTGAAGACGTCTTTGAAATGGTGATCCCTGGGAAGGAAATTCCAGCATGGTTTGAGCATCAGGAGCAAGGTAACGGAGTATCAGTCCCATTCCCGCATAATTGCCCTTCAACTCAAACCATGGCACTTTCTCTTTGTTTTGTATTTGATGGTCAAAGCTACGGAATGAAGCCTTCAATGATCTGCTGCAATGGTAAAGAATTCATCAACCAGAGTTTATTAAAGGTGTTGCCCGATATGTATTCTGGGAATATGTACATTGTCTTCTTGAATGGTTGCTATTTTAGTAACCTGTTAGGCCAACACAATTGCTTCCATATCCTATTTCCCGATGATACTTATTATAAAATTGATATCCCTATAACAAGATCTGCAGCACGTTGGGTGTGTAACCAAGACATTCAAGATTTCAAGAAAAGAAAAGCAACTCTTCAACTGAGTCAGCAAGAAAGGCACCAAATTGGAACCATGTGA 2442 0.3911 MKNLVGIESRVEQVISQIGLGLNDVRYIGIWGLGGIGKTTIARAVFETIQNRFEVSCFLADVRHYSGDITRLQNELLKQISPNADYNKFDGSKKIQTSFRNRKVLIVLDDVSHENQLENLANEKDWFGPGSRIIITTRNKEVLKQQEGHGTYEVKELVESEAINLFCSKAFNRPEPIVGFLNLSKEVGNYSGGLPLALKVLGWGKDEVTKILEECGYDAEIGIDILANRSLITLEQRRHEGTVVGMHDLLQEMGKQIVIQESPKDASKRSRSWCYKDIESLLSQKQQLKAWFYGKPWTDTEENWRDLDIRGSCFSKLQLLILDGVTAPILYNIPCTLKVLRWSNCPMETLPLRDQRYELVEIDLSESEIVQLWEGKKFLYKLEHLDLFCCNKLKEVPDLSGAPNLKTLTIRYCVELNYIHPSLTHHKSLVELNLRECNCLETLGDKLEMSSLKQLDLQGCDSLSRVPEFGECMKQLSILNLPLGDIEELPSTFGNLVGLTELYLDVWGYIDHPISLGCFLCLKSLTITAFHQIQIQNIDRLLTSVSLLTSLTSLTLINCFPKSQESIPYCDLAHLAFLTDLYLSYNHFKMVPISIHQLPRLTQLQLNNCSELEVLPDLPSSLRLLQAIGCYSLDASNVNDVISKACCVFAESTSQDGEDVFEMVIPGKEIPAWFEHQEQGNGVSVPFPHNCPSTQTMALSLCFVFDGQSYGMKPSMICCNGKEFINQSLLKVLPDMYSGNMYIVFLNGCYFSNLLGQHNCFHILFPDDTYYKIDIPITRSAARWVCNQDIQDFKKRKATLQLSQQERHQIGTM 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272020g00008 813 Gene3D Ribonuclease Inhibitor 293 467 IPR032675 -
Stsc272020g00008 813 Gene3D Ribonuclease Inhibitor 468 641 IPR032675 -
Stsc272020g00008 813 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 468 IPR044974 GO:0006952
Stsc272020g00008 813 PRINTS Disease resistance protein signature 98 112 - -
Stsc272020g00008 813 PRINTS Disease resistance protein signature 191 205 - -
Stsc272020g00008 813 PRINTS Disease resistance protein signature 27 42 - -
Stsc272020g00008 813 PRINTS Disease resistance protein signature 447 463 - -
Stsc272020g00008 813 SUPERFAMILY L domain-like 311 633 - -
Stsc272020g00008 813 Gene3D - 1 149 IPR027417 -
Stsc272020g00008 813 Pfam C-JID domain 665 748 IPR045344 -
Stsc272020g00008 813 Pfam NB-ARC domain 10 203 IPR002182 GO:0043531
Stsc272020g00008 813 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 202 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272020g00008 Stsc-Chr272020 31121 33997 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272020g00008 3 558 WRKY Transcription Factor Family AT4G12020 27.314 2.19e-47 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272020g00008 - - ahf:112797503 787.334