Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272017g00012 ATGCCAATAAAACGTTGTAAAAGGCCATACGTGGATGATGATTTCTCTTCTTGGGCCCCTGGGTTTCAAGCTCTGAAAGAAGCTCAGAAGTTCAAGTCAGAAAATCCCTCTTTCATAGTCAAGGCAAGGAAATCTAGTTTATCAAAAACACCAGCTAATTTCCAAGCTTCCTTTTATAGAAAGTATTTCAAAAGTTATGAACAGCATATACAGATAAGGTCTGAGAGGGAGTTGTTGCCTGCAAAGGTTAGCTATAATCAATATAATTGTCTTGCCACCATCTCTGCTGGTTGGAGCCTTTTTGCCCGAAGAAGTAAATTACAGCCCGGGGATGTTACTGTCTTTGAGCTCATCAACAGAGAAGATCCGCTGTTTGACGTTCATATTTATAGAGCCCACGGTTAG 405 0.4074 MPIKRCKRPYVDDDFSSWAPGFQALKEAQKFKSENPSFIVKARKSSLSKTPANFQASFYRKYFKSYEQHIQIRSERELLPAKVSYNQYNCLATISAGWSLFARRSKLQPGDVTVFELINREDPLFDVHIYRAHG 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272017g00012 134 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 24 132 IPR044837 -
Stsc272017g00012 134 ProSiteProfiles B3 DNA-binding domain profile. 94 133 IPR003340 GO:0003677
Stsc272017g00012 134 SUPERFAMILY DNA-binding pseudobarrel domain 31 133 IPR015300 -
Stsc272017g00012 134 Gene3D - 22 133 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272017g00012 Stsc-Chr272017 68244 68874 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272017g00012 23 133 B3 DNA Binding Superfamily AT3G18990 29.464 8.50e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272017g00012 - - adu:107471605 149.828