Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272015g00007 ATGGAGCAGAAGAGGAGAATTGACAAAGAAAGCAGTTCTCAGGGTTTTAGGAAGGTTGATCCAGATCGATGGGAATTTGCAAATGAGGGCTTTTTGAGGGGTCAAAAGCACTTGCTTCGGAATATAACACGAAGAAAACCTGCCCATGGTCATAATCATCAACAATCTCAGCAATCACATGTACAAAATTCGTCAGTAGGGGCATGTGTAGAAGTTGGTAAGTTTGGGCTCGAGGAAGAGGTTGAGAGGCTTAAAAGAGATAAAAATGTGCTCATGCAGGAACTTGTCAGGCTGAAACAGCAACAACAGACCACTGATGGCCAGCTGCAAACAATGGTTCAACGCCTTCAGGGCATGGAGCAAAGACAGCAACAAATGATGTCATTCCTTGCTAAAGCTGTTCAGAGCCCTGGCTTCTTTGCTCAGTTTGTACAACAGCAAAATGACAATAATAGGCGTATAACTGAAGTCAACAAAAAGCGCCGGCTCAAGCAAGAAGGCATTGCTGAAGCTGACAGTGCTTCTGCTCCTGATGGGCAAATTGTTAGATATCAACCTCCGATTAACGATTCAGCAAAAGCAATGCTAAGACAGATCATGAAATGGGATACTTCTCATGCAGAATCTTTTAGTAAAAATCCTGATAATTACTTGATTGGTGATGGTTCGTCATCATCATCTGGTGCAATGGATAGTGGCAGCTCTTCAAGCTGGACCTCTGGTGTAACACTTCAGGAGGTCCCTCCAACTTCAGTGCAGTCTTCTCATATTCCAATTATGCCAGGGGCTCCAGGGCATGTACCTTCAGCTGCCAAACCTGAAATTCAATCTTTACCGCAAGCTGGAGCTCCTGAAAAGGTTTCCAATGATGGAGCATCTGGCATACCTTCTATCCATGTTCCTCAAGCAGATGTCATAATGCCTGATCTTGCACCAATAGATGAAATAGAGTCTGGAAGTATGCTTGGTATTCCTGAAGATAATTATATGGCTCCCGAAGCTGGTGATGAGGGATTCATGGATCCTGATTCATTGGGGGTTAGTGGATCATTTCCCCTTGATTTCGAAGGAATTTCACCTGATGCAGACATTGATGACTTGTTAGGAAATCCTTCTATTTGGGATGATCTTTTGCAAACCCCAGCACAAGAGGATACTGATGTTGAAGCTTCCAAAGATAATGAGATGCAACCAGCTGAAAATGGTTGGGATAAAACTCAACATTTGGATCAACTTACAAAGCAGATGGGTCATCTTTCTTCTGAGGCAAAATAG 1275 0.4329 MEQKRRIDKESSSQGFRKVDPDRWEFANEGFLRGQKHLLRNITRRKPAHGHNHQQSQQSHVQNSSVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLKQQQQTTDGQLQTMVQRLQGMEQRQQQMMSFLAKAVQSPGFFAQFVQQQNDNNRRITEVNKKRRLKQEGIAEADSASAPDGQIVRYQPPINDSAKAMLRQIMKWDTSHAESFSKNPDNYLIGDGSSSSSGAMDSGSSSSWTSGVTLQEVPPTSVQSSHIPIMPGAPGHVPSAAKPEIQSLPQAGAPEKVSNDGASGIPSIHVPQADVIMPDLAPIDEIESGSMLGIPEDNYMAPEAGDEGFMDPDSLGVSGSFPLDFEGISPDADIDDLLGNPSIWDDLLQTPAQEDTDVEASKDNEMQPAENGWDKTQHLDQLTKQMGHLSSEAK 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272015g00007 424 MobiDBLite consensus disorder prediction 1 20 - -
Stsc272015g00007 424 MobiDBLite consensus disorder prediction 400 424 - -
Stsc272015g00007 424 Coils Coil 74 101 - -
Stsc272015g00007 424 MobiDBLite consensus disorder prediction 221 254 - -
Stsc272015g00007 424 MobiDBLite consensus disorder prediction 379 424 - -
Stsc272015g00007 424 Gene3D - 3 46 IPR036388 -
Stsc272015g00007 424 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 15 227 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272015g00007 Stsc-Chr272015 27370 30441 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272015g00007 9 423 HSF AT1G32330 48.956 2.05e-119 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272015g00007 K09419 - gmx:100815121 568.54