Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272014g00001 ATGGCTCAGCATTGTTCTCTTCTGCTGTTACTACTGCTATTTGTTCTTGGGATCCTCTTGGAAGAAGCTAGTGCAGGAAAATGCAAGAGAAAATGTGGGTCCCTCACTATTCTCTTCCCTTTCGGCACCACGGAGGATTGTGCCCTCGACACTTCCTTTCTCATTGACTGCAACACAAACAGCAATACCGCATACTTGCCACAAACTAACTTAACAGTGCAGAGCATCTCCCTCAATGGCCAACTACGACTTTCTTTTCCGGTAGCCAGCTATTGCTACACCGGCAAAAATGGTACCAAAGGCTTAGAAACCAACCAAACGACTCAGCAACACAACCTCACTCATTTCTCCATCTCCCCCACTCAAAACAAGCTCTTCGTTGTTGGTTGTAACACAATTGGAGCAGTGAATGCGTATGATTCAGAGGGGAAGAAGTACTTCACAGGGTGCTTGGCATTGTGCAACACGCCTGACTATGCAACCAACGGCACGTGCACGGGAGTGGGTTGTTGCGAGATTCCAATCATGGCCGCACAAGAGCTATCTAGCATTTTCTATGTTTCTCTTCGTGCCTTCACCAGCAACAGCTATGTCAGCAGTTTCAACCCCTGCAGTTATTCCTTTGTTGCAGAAGACGGAGCCTACAAGTTCTCCTCCTCCGATCTTGCCAAGTTCCACCACGCCACGTTCCCAACGGTGCTGGATTGGAGTGTGGGGAACCTGACTTGCCAACAAGCCAAGAAGAACAAGAATCATGATTTTGCGTGTAAGGCTGAGAATAGTGAATGTGTCAATGCAAGGGAAGATGGTTATCTATGCAATTGCTCTGCTGGTTTTACTGGAAATCCTTATGTCCCTAACGGTTGCCAAGATGTTAATGAATGCATGAAATCCCACGATTGCTATAGTAAAGCAATATGCCAAAACCTTCCTGGTAGCTATAGCTGCTCCTGTCCAAAAGGATATTCAGGAGATGGGAAAAAGTATGGAACACAATGCCGACCCAATTCCACTTCCAATTCCAGAGCAAAGAACATTTTGATAATTGCATTGAGTATTAGTGGAGGAGTGATAGCATTACTTGTGGTGAGCTTTTATGTGTATTGGAGAATGAAGCAAAAGAAGCTAACCGAACTTAAAGAGCAATATTTTCAGCAAAATGGTGGCCTATTGTTACAACAACTTATTGCTAGACAAAGAGAATCAACTGATGAAACAGCTAAAGTTTTCACTGTGGATGAATTAAACAAGGCCACTAACAACTTTGATGAAAGCAAGATCCTAGGTAAAGGGGGTCAGGGAACTGTTTATGAAGGACTATTATCAGATAACAAGACTGTAGCAATAAAAAGGTCCAAGATCAGTGACCCAAGTCAGATTGAACAGTTCATCAATGAGGTGGTTGTGCTTTCCCAAATCAACCATAAGAATGTGGTTAAGCTTTTGGGTTGTTGTTTAGATGCACAAGTTCCATTGCTTGTTTATGAGTTCATTCCCAATGGTACTATTTTTGAGCATCTTCATAGTCATAACCAATCCTTAAGGCTTTCTTGGAAAACAAGATTGAGGATAGCGGCGGAAACTGCTGGGGCTTTAGCTTACTTACATTCTGTTACTTCTCCTCCAATCATACACAGAGATGTGAAAACTACTAACATACTTCTTGATCATGATCTTGTAGCGAAGGTTTCGGATTTCGGAGCTTCAAGAATTGTTCCCCTTGATAAGACACAGTTAACCACATTGGTGCAGGGGACATTAGGGTATCTTGATCCTGAATACTTCCAAACAAGTCAACTAACTGAGAAAAGCGATGTTTATAGTTTTGGAGTTGTAATGGTAGAGTTACTAACAGGAAGAAAGGCACTCTCTTTCGACAGGCCGGAGAATGATAGAAACCTTGCTTTGTATTTCATTTCTTATATGAAAGAGGGAAATTTACTTGACATTGTGGACAACCATGTAATGAATGAGGCAAGGGTTGAGCAAATAATTGAGTTTGCTAATGTTGCGAAACGTTGTTTAAGAGTGATGGGAGAGAAAAGGCCTACAATGAAAGAAGTGGCAATGGAGCTTGAGGGACTTAGAGTTGAAGAAAATCATGGAAGAGAAAGTGATAAGTTATTGTATTCTGAAGAGACAGAGGAGTTGCTTAAATCAACAGTATCTGCTACTTGCAATGTTGAAGATGGGAGTGGTGGAAGTGGCATGAGTTCCGGGGTTAATAGTAGCATTGGTCAGATTTCTATGTCATTGGGTGGAGGCAGATGA 2271 0.4236 MAQHCSLLLLLLLFVLGILLEEASAGKCKRKCGSLTILFPFGTTEDCALDTSFLIDCNTNSNTAYLPQTNLTVQSISLNGQLRLSFPVASYCYTGKNGTKGLETNQTTQQHNLTHFSISPTQNKLFVVGCNTIGAVNAYDSEGKKYFTGCLALCNTPDYATNGTCTGVGCCEIPIMAAQELSSIFYVSLRAFTSNSYVSSFNPCSYSFVAEDGAYKFSSSDLAKFHHATFPTVLDWSVGNLTCQQAKKNKNHDFACKAENSECVNAREDGYLCNCSAGFTGNPYVPNGCQDVNECMKSHDCYSKAICQNLPGSYSCSCPKGYSGDGKKYGTQCRPNSTSNSRAKNILIIALSISGGVIALLVVSFYVYWRMKQKKLTELKEQYFQQNGGLLLQQLIARQRESTDETAKVFTVDELNKATNNFDESKILGKGGQGTVYEGLLSDNKTVAIKRSKISDPSQIEQFINEVVVLSQINHKNVVKLLGCCLDAQVPLLVYEFIPNGTIFEHLHSHNQSLRLSWKTRLRIAAETAGALAYLHSVTSPPIIHRDVKTTNILLDHDLVAKVSDFGASRIVPLDKTQLTTLVQGTLGYLDPEYFQTSQLTEKSDVYSFGVVMVELLTGRKALSFDRPENDRNLALYFISYMKEGNLLDIVDNHVMNEARVEQIIEFANVAKRCLRVMGEKRPTMKEVAMELEGLRVEENHGRESDKLLYSEETEELLKSTVSATCNVEDGSGGSGMSSGVNSSIGQISMSLGGGR 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272014g00001 756 MobiDBLite consensus disorder prediction 729 750 - -
Stsc272014g00001 756 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 307 318 IPR000152 -
Stsc272014g00001 756 FunFam Fibrillin 2 286 330 - -
Stsc272014g00001 756 Pfam Calcium-binding EGF domain 291 333 IPR001881 GO:0005509
Stsc272014g00001 756 Pfam Protein tyrosine and serine/threonine kinase 425 692 IPR001245 GO:0004672|GO:0006468
Stsc272014g00001 756 Gene3D Laminin 242 294 - -
Stsc272014g00001 756 CDD STKc_IRAK 428 695 - -
Stsc272014g00001 756 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 24 699 IPR045274 GO:0007166
Stsc272014g00001 756 ProSiteProfiles Protein kinase domain profile. 422 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272014g00001 756 Gene3D Phosphorylase Kinase; domain 1 393 497 - -
Stsc272014g00001 756 Gene3D Transferase(Phosphotransferase) domain 1 498 716 - -
Stsc272014g00001 756 FunFam Wall-associated receptor kinase 2 391 497 - -
Stsc272014g00001 756 SUPERFAMILY EGF/Laminin 290 328 - -
Stsc272014g00001 756 MobiDBLite consensus disorder prediction 729 756 - -
Stsc272014g00001 756 SMART egf_5 294 334 IPR000742 -
Stsc272014g00001 756 SMART egf_5 242 290 IPR000742 -
Stsc272014g00001 756 ProSitePatterns Calcium-binding EGF-like domain signature. 291 316 IPR018097 GO:0005509
Stsc272014g00001 756 Pfam Wall-associated receptor kinase galacturonan-binding 28 81 IPR025287 GO:0030247
Stsc272014g00001 756 ProSitePatterns Serine/Threonine protein kinases active-site signature. 543 555 IPR008271 GO:0004672|GO:0006468
Stsc272014g00001 756 CDD EGF_CA 291 325 - -
Stsc272014g00001 756 Gene3D Laminin 295 333 - -
Stsc272014g00001 756 SUPERFAMILY Protein kinase-like (PK-like) 406 692 IPR011009 -
Stsc272014g00001 756 FunFam Wall-associated receptor kinase 2 498 715 - -
Stsc272014g00001 756 ProSiteProfiles EGF-like domain profile. 291 334 IPR000742 -
Stsc272014g00001 756 SMART egfca_6 243 290 IPR001881 GO:0005509
Stsc272014g00001 756 SMART egfca_6 291 334 IPR001881 GO:0005509
Stsc272014g00001 756 SMART serkin_6 422 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272014g00001 Stsc-Chr272014 6568 10036 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272014g00001 6 725 Receptor kinase-like Gene Family AT1G21230 45.267 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Stsc272014g00001 Pkinase 5.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272014g00001 - - aip:107607783 1316.21