Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272012g00006 ATGTTGGAAGGTGGTGCTAAATTCCCTGGACTAATAGATCTCAACAAGCAATCAACTGATAACTATTATGATTTCTCTCAAGGATTTTATCATAAGCTTGGGGAGGGGACCAATATGTCGATTGATAGCATGCAAACAAGCAATGGTGGGGGATCTGTTGCGATGTCCATAGATAATAGCAGTGTTGGGTCCAATGATTCCCATACTCGCATATTGAACCACCAAGGGTTGAAGAGGCGTTCAAATGATAACTACTCTGTTCAACACAGTGCAAATCGTCGAGGAAGAGTCACACATGCACTGAGTGATGATGCTTTGGCTCAAGCTCTAATGGATAGCAGTTCACCAACTGAGGGGCTTGAAAATTTCGATGAGTGGACAATTGATTTGAGGAAGCTTAGTATGGGTGAGGCCTTTGCTCAAGGAGCTTTTGGGAAACTCTATCGGGGAACCTACAATGGTGAAGATGTTGCTATCAAAATCTTGGAGAGGCCTGAAAATGATTTATCAAAAGCTCAGTTGATGGAACAACAGTTTCAGCAGGAGGTTATGATGCTGGCTACACTAAAGCATTCTAATATAGTTCGCTTCATTGGCGCATGCAGAAAACCGATGGTATGGTGCATTGTAACGGAATATGCCAAAGGAGGTTCCGTTAGACAGTTTTTAATGAAGCGTCATAACCGAACAGTTCCCCTAAAATTGGCTGTCAAACAGGCTTTGGATGTTGCTAGAGGCATGGCATATGTTCATGGACTTGGGTTGATCCACAGGGATTTGAAGTCTGATAATCTTTTGATTTTCGGGGACAAATCAATTAAAATTGCTGACTTTGGAGTTGCAAGGATTGAGGTGCAAACTGAAGGAATGACACCTGAGACTGGAACATACCGCTGGATGGCTCCGGAGATGATCCAGCACAGGCCTTACACACAAAAGGTGGATGTTTATAGCTTCGGTATTGTTCTTTGGGAGCTTATCACTGGAATGCTTCCGTTTCAGAACATGACAGCAGTGCAGGCAGCATTTGCAGTTGTGAACAAAAATGTCCGCCCGATTGTACCTAACGATTGCTTACCCGTTCTCCGTGAAATCATGACAAGATGCTGGGATCCCAACCCTGATGTCCGGCCACCTTTTGCAGAAATTGTAGGAATGCTCGAGAATGCAGAGACTGAGATCTTGACAACTGTTCGGAAAGCCCGTTTCAGGTGCTGCCTGACACAACCAATGACTGCTGACTGA 1245 0.4434 MLEGGAKFPGLIDLNKQSTDNYYDFSQGFYHKLGEGTNMSIDSMQTSNGGGSVAMSIDNSSVGSNDSHTRILNHQGLKRRSNDNYSVQHSANRRGRVTHALSDDALAQALMDSSSPTEGLENFDEWTIDLRKLSMGEAFAQGAFGKLYRGTYNGEDVAIKILERPENDLSKAQLMEQQFQQEVMMLATLKHSNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLMKRHNRTVPLKLAVKQALDVARGMAYVHGLGLIHRDLKSDNLLIFGDKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKNVRPIVPNDCLPVLREIMTRCWDPNPDVRPPFAEIVGMLENAETEILTTVRKARFRCCLTQPMTAD 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272012g00006 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Stsc272012g00006 414 FunFam serine/threonine-protein kinase HT1 216 409 - -
Stsc272012g00006 414 SUPERFAMILY Protein kinase-like (PK-like) 115 387 IPR011009 -
Stsc272012g00006 414 SMART serkin_6 133 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272012g00006 414 PANTHER SERINE-THREONINE PROTEIN KINASE 58 389 - -
Stsc272012g00006 414 PRINTS Tyrosine kinase catalytic domain signature 211 224 IPR001245 GO:0004672|GO:0006468
Stsc272012g00006 414 PRINTS Tyrosine kinase catalytic domain signature 249 267 IPR001245 GO:0004672|GO:0006468
Stsc272012g00006 414 PRINTS Tyrosine kinase catalytic domain signature 295 305 IPR001245 GO:0004672|GO:0006468
Stsc272012g00006 414 PRINTS Tyrosine kinase catalytic domain signature 314 336 IPR001245 GO:0004672|GO:0006468
Stsc272012g00006 414 PRINTS Tyrosine kinase catalytic domain signature 358 380 IPR001245 GO:0004672|GO:0006468
Stsc272012g00006 414 Gene3D Phosphorylase Kinase; domain 1 122 215 - -
Stsc272012g00006 414 Gene3D Transferase(Phosphotransferase) domain 1 216 408 - -
Stsc272012g00006 414 FunFam Serine/threonine-protein kinase isoform 1 123 215 - -
Stsc272012g00006 414 CDD STKc_MAP3K-like 140 387 - -
Stsc272012g00006 414 Pfam Protein tyrosine and serine/threonine kinase 134 386 IPR001245 GO:0004672|GO:0006468
Stsc272012g00006 414 ProSiteProfiles Protein kinase domain profile. 133 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272012g00006 Stsc-Chr272012 65179 68306 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272012g00006 1 414 MAP Kinase Kinase Kinase AT2G24360 78.313 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Stsc272012g00006 PK_Tyr_Ser-Thr 2.9e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272012g00006 - - gmx:100788536 786.563