Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272010g00007 ATGGCTGTTGCTGGCGAAGTTTCACTAGATGAGCGTGATAAGGAATATGACCAATATGGAATTTGTATCAAAGTCAAATTCAGACAAAATGGAAAACTTGAAGTTCTTAGTGCTCATCATCAATCTGGAGGGGAGCGATCAGTTTCAACTATCGTATATCTTCTTTCCCTTCAGGATCTTACAAATGTCCCATTTAGAGTTGTTGATGAAATCAACCAGGGCATGGACCAAATAAACGAAAGAAAGATGTTCCAGCAACTAGTCAGAGCTGCAAGCAAGCCGAATACGCCACAGTGCTTCTTGCTTACCCCCAAATTGCTTCCAGACCTTGAATATAGTGAAGCATGCACCATATTGACTGTGATGCACGGCCCTTGGATTCCCCAACCCACAGAGATATGGAAGGAAGGTGAACGATATGGTATTGTCTGCGGTCTCTTGGGGAAAACCCATTGTTGA 459 0.4314 MAVAGEVSLDERDKEYDQYGICIKVKFRQNGKLEVLSAHHQSGGERSVSTIVYLLSLQDLTNVPFRVVDEINQGMDQINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLEYSEACTILTVMHGPWIPQPTEIWKEGERYGIVCGLLGKTHC 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272010g00007 152 Gene3D - 1 123 IPR027417 -
Stsc272010g00007 152 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 1 132 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Stsc272010g00007 152 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 103 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272010g00007 Stsc-Chr272010 53788 55659 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272010g00007 1 141 Structural Maintenance of Chromosomes family AT5G15920 78.723 1.43e-77 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272010g00007 K22803 - gmx:100778678 261.151