Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272010g00006 ATGTGCTCGATTTTTGGTGTTGAATTACGCCAACTTGAGAAAGAGACTGAGAGTCGTCAACAGCAGCTGAAAAAATACTTGAATATTGCTGAATCAATTGCACCTTTGACACCTGAGCTAGAGAGCGAATTTCGCAAGATGCCCACTACAATTGAGGATTTAAATACTGCTATCCGAGAAACAATCTTTGAAGCTGGGTCAATATTTACACCTAATAGTAATGCATTGGAGGAGTATGAGGGTCGGCAACAAAAGGTACTTGTTCTGTTCTTGCACTTAGCTTTGCATTATGTTGACATGTCAAGTGAAGTCACGGTTAATTTTCAGATAGAAGAGCTTGCAGCAGAACTTGCTGCAGAGGAAGAAAAACATGGAAGGTCTAATACTGAAATTGAGGAAATTAAGGTTAGTTAA 414 0.3913 MCSIFGVELRQLEKETESRQQQLKKYLNIAESIAPLTPELESEFRKMPTTIEDLNTAIRETIFEAGSIFTPNSNALEEYEGRQQKVLVLFLHLALHYVDMSSEVTVNFQIEELAAELAAEEEKHGRSNTEIEEIKVS 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272010g00006 137 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 9 135 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Stsc272010g00006 137 Coils Coil 9 29 - -
Stsc272010g00006 137 Coils Coil 110 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272010g00006 Stsc-Chr272010 50248 52202 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272010g00006 13 101 Structural Maintenance of Chromosomes family AT5G15920 42.697 3.92e-16 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272010g00006 K22803 - csin:114290007 80.1073