Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272010g00005 ATGGAGGAACCACGTCCAACCAAGCGCCCTAAAATTGTCAGGGGGGATGATGATTATATGCCTGGAAACATTCTTGAGATTGAGCTTTCTAAGTTCATGACCTTGGATCACTTGAAATGCAAACCTGGGCCTCGACTGAATCTTGTAGTTGGACCCAATGGTTCTGGAAAAAGTTCTCTTGTGTGTGCTATTGCACTTGGCCTTGCAGGAGAGCCTCAGTTGCTTGGGCGAGCAACTAGTGTTGGGGCATATGTAAAGCGGGGAGAAGAGTCTGGATCCATTAAGATTACATTGAGAGGGAATAGTAAGGATGAGCTTATTGCCATTACTCGCAAAATAAATACTAACAACAAGTCTGAGTGGTTGTTAAATGGGAATATAGTTCCCAAAACTAATGTAGCTGAAACCGTTAAGAGGTTTAACATCCAAGTCAATAACTTGACACAATTCTTACCACAAGACAGGGTTTGTGAGTTTGCAAAGTTAACTCCAGTCCAGCTTCTGGAAGAAACTGAAAAGGCTGTTGGTGATCCACAACTTCCTGAGCAACATGGTGCACTAGTTAATAAAAGTCTTGTATTGAAGAGGATTGAAGTGTCTATGGAGAGACATACAGGAACCTTGAATCAGTTGAAGCAACAAAATGCTGAACTAGAGAAGGATGTTGAGCGTGTCCGTCAAAGAGATGAGATTCTTGCCAAGGCTGCAACCATGAAAAAGAAATTGCCTTGGCTTGAATATGAATCGAAGAACGCTCAATATTTGGAAGCTAAGCAACGTGAGAATAATTCGGCAAAGGCAATGGAGGAAGCTGCAAAGTTACTAAATGATCTCAAGGAACCTATTGAGAAACAGAAGGAGGAACAGGCTGCATTAGATGGCAAATTGAAAAAGGTTGACAGCCGTATAGAAGAGAACTACAAGAAGCGAACAGAACATCTTGCTAGAGCGGACCAACTGGATGTGAAGCTGCAAGGGAAGTACAAGGATATGAAAAATTTGAGAGAAGAGGAAGAAACCAGGCAAAAAGAACTTGAAAAAATTAGGAAGGAACTTGCTGCTGCTGAACTTGAACTTGAGAATCTAGGTCCTTCTGATCCTGGTCGAAAAGAAGAGATGCAAAGACTACGAGCTGAAACCTCTAATATTGATTATGAAGCAAAAGTGTTGCAGTCTCACATATCTCATGTAGAGAGTGAAAAAAGTCATAAAGTGGAATCGTTGAATAAATGTAAAGAAAGGTTGGAGGGCATGGACAATAAAGTTACAAAATGTTTCGATGTATTGCGAAAGGCAGGGACAGACAAGATTTTTGAAGCCTTTAATTGGGTCCAAGAACATCATAACCTCTTCAATAAGAAGGTTTATGGCCCAGTATTAGTAGAGGTGAATGTCTCAGATCGAGGTCATGCTGCTTATCTAGAGGGTCAAGTTGCGCAATATATTTGGAAGTCGTTGATAACACAAGATCCTGGTGATCGGGACCTCTTGGTGAAGAACCTAAAACGCTTTGATGTTCCAGTTTTAAATTATACTGGTGATGTTGACCAACGAAGAGGGACTTTTGGAATTCGAAATGACATGCGTGCCCTTGGCATTTACTCCCGGCTGGACCAAGTCTTTGATGCTCCGACTCCATTGCTGTCAAGGAGGTTTTGA 1659 0.4165 MEEPRPTKRPKIVRGDDDYMPGNILEIELSKFMTLDHLKCKPGPRLNLVVGPNGSGKSSLVCAIALGLAGEPQLLGRATSVGAYVKRGEESGSIKITLRGNSKDELIAITRKINTNNKSEWLLNGNIVPKTNVAETVKRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPEQHGALVNKSLVLKRIEVSMERHTGTLNQLKQQNAELEKDVERVRQRDEILAKAATMKKKLPWLEYESKNAQYLEAKQRENNSAKAMEEAAKLLNDLKEPIEKQKEEQAALDGKLKKVDSRIEENYKKRTEHLARADQLDVKLQGKYKDMKNLREEEETRQKELEKIRKELAAAELELENLGPSDPGRKEEMQRLRAETSNIDYEAKVLQSHISHVESEKSHKVESLNKCKERLEGMDNKVTKCFDVLRKAGTDKIFEAFNWVQEHHNLFNKKVYGPVLVEVNVSDRGHAAYLEGQVAQYIWKSLITQDPGDRDLLVKNLKRFDVPVLNYTGDVDQRRGTFGIRNDMRALGIYSRLDQVFDAPTPLLSRRF 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272010g00005 552 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 1 548 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Stsc272010g00005 552 Gene3D - 23 227 IPR027417 -
Stsc272010g00005 552 Coils Coil 251 288 - -
Stsc272010g00005 552 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 315 IPR027417 -
Stsc272010g00005 552 Coils Coil 317 358 - -
Stsc272010g00005 552 Coils Coil 194 228 - -
Stsc272010g00005 552 Pfam RecF/RecN/SMC N terminal domain 25 147 IPR003395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272010g00005 Stsc-Chr272010 38969 49136 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272010g00005 5 544 Structural Maintenance of Chromosomes family AT5G15920 56.296 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272010g00005 K22803 - gmx:100778678 748.814