Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272006g00006 ATGGGGAACAATAGCATGTTTCGTTATGCAGATGGTGTTGACAAGTTGTTAATGTTCTTTGGAACCATTGGAAGCATTGGTGATGGATTGCAGAACCCTCTTATGATGTACATTCTTAGTGATGTCATCAATGCTTATGGAGACAAGAATGCCAAATTGGGTATGCATGATGTGAACAAGTATGCATTGAGGCTTTTATTAGTTGCAATTGGAGTTGGACTTTCTGCTTTTGTAGGTAAGTTGCATACTTCAGAATTCAGTTAA 264 0.3788 MGNNSMFRYADGVDKLLMFFGTIGSIGDGLQNPLMMYILSDVINAYGDKNAKLGMHDVNKYALRLLLVAIGVGLSAFVGKLHTSEFS 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272006g00006 87 Gene3D ABC transporter type 1, transmembrane domain 2 86 IPR036640 GO:0005524|GO:0016020
Stsc272006g00006 87 SUPERFAMILY ABC transporter transmembrane region 7 79 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272006g00006 Stsc-Chr272006 49635 50253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272006g00006 6 77 Calmodulin-binding Proteins AT2G36910 35.135 1.71e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272006g00006 K05658 - gmx:100789562 137.502