Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272005g00010 ATGGCGGCACCCTTTACTACTCATCACTTGCTTGTTATTCTTTCCGTTCTTGCTGCTTGTTCTATAGTGAGCAATGCACAACTCTCATCAAATTTCTATGACAAAACTTGTCCTAATCTTCAAAGCATTGTGCTGAGTACAATGAAGCAAGCTGTCATCAATGAACCTCGAATGGGTGCCTCCATTCTTCGCTTGTTCTTCCATGATTGCTTCGTTAATGGGTGTGATGGATCGATCTTATTGGATGACACAGCGACATTCACAGGAGAGAAAAGTGCAGGACCAAACAAAAATTCAGCACGTGGTTTCAATGTGATAGACACCATTAAAAGCAATGTTGAAGCTTCTTGCAATGATACTGTATCTTGTGCTGACATTCTTGCACTTGCTGCTAGAGATGGAGTAGTTCTGCTAGGAGGACCTTCATGGACAGTGGCACTGGGAAGAAGGGATGCAACAACAGCAAGCCAATCTGCAGCCAACAACCAAATCCCTTCACCATTCTCCGACCTTTCCACCCTCACTTCCATGTTCTCTGCCAAAGGCCTCACCGCACGCGATCTCACCGCCCTCTCCGGCGCCCACACCATCGGCCAAGCTCAGTGCCAGTTCTTCAAAAACCGCATATACAACGAAACCAACATCGATCCCAGTTTCGCCACTTCACGTAAAGTTAACTGTCCTTTCACAGGAGGGAACACAAACCTGGCTCCTCTTGAAACCCTAACTCCGGCTCGATTTGACAACAATTACTATAGAGACCTTGTTGCAAAACGCGGCCTTCTTCATTCGGATCAAGTTCTTTTCAATGGTGGGAGTCAAGATGGTTTGGTTAGGTCTTATAGTGCCAATAATGGCGGCGTTGCTTTTTTCAGTGATTTTGCTGCTGCCATGGTTAAGATGGGAAATATTAGTCCTCTCACTGGGAGTAGTGGGGAGATTAGAAAGAATTGTAGGGTGGTGAATTAA 969 0.4561 MAAPFTTHHLLVILSVLAACSIVSNAQLSSNFYDKTCPNLQSIVLSTMKQAVINEPRMGASILRLFFHDCFVNGCDGSILLDDTATFTGEKSAGPNKNSARGFNVIDTIKSNVEASCNDTVSCADILALAARDGVVLLGGPSWTVALGRRDATTASQSAANNQIPSPFSDLSTLTSMFSAKGLTARDLTALSGAHTIGQAQCQFFKNRIYNETNIDPSFATSRKVNCPFTGGNTNLAPLETLTPARFDNNYYRDLVAKRGLLHSDQVLFNGGSQDGLVRSYSANNGGVAFFSDFAAAMVKMGNISPLTGSSGEIRKNCRVVN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272005g00010 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Stsc272005g00010 322 CDD secretory_peroxidase 27 321 IPR033905 GO:0004601|GO:0042744
Stsc272005g00010 322 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Stsc272005g00010 322 Gene3D Peroxidase, domain 2 165 301 - -
Stsc272005g00010 322 FunFam Peroxidase 31 175 - -
Stsc272005g00010 322 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272005g00010 322 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272005g00010 322 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272005g00010 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272005g00010 322 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272005g00010 322 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272005g00010 322 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272005g00010 322 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272005g00010 322 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272005g00010 322 ProSiteProfiles Plant heme peroxidase family profile. 27 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272005g00010 322 Gene3D - 31 319 - -
Stsc272005g00010 322 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272005g00010 322 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272005g00010 322 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272005g00010 322 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272005g00010 322 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272005g00010 322 SUPERFAMILY Heme-dependent peroxidases 27 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc272005g00010 322 Pfam Peroxidase 46 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272005g00010 322 PANTHER PEROXIDASE 72-RELATED 23 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272005g00010 322 FunFam Peroxidase 165 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272005g00010 Stsc-Chr272005 51502 54550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272005g00010 23 322 Peroxidase AT5G05340 66.556 3.45e-143 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272005g00010 K00430 - gmx:100810392 513.072