Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272005g00004 ATGAGAGGATCATTTAATTTGATAGGAGCAACACCAAAGTTGGTTCTTCAGTTGATGAATGTCAGAGGACTTAGCATTGCACATGTCAAGAGTCATTTGCAGATGTATCGAAGTAAGAAGCTTGATGAGTCTGGCCAAGTTTTATCCCAAAGTAGGGCAATGCAACAAGGAAGGCATCAAATTCTGGAGATGTACCAAAGACTAAATAATGCACAGGGACACTTTGGAGTTGATAGCATTATTAACAGGAGTAGTAATTATGTACCTCCATCTCTCCTCATCAAACAACAACCATACGACATTAAACCTCCTCATCATCATGTCTCTTCAAGATTTCACCCAACTGGGATTTTCATCAATAGTCAAATGATCACAAGATCAAGTTCATTGGAGGACAAAGATTTATCATCAAGGTTATATGAAGCAAGCTCACATCTATTTGATGTAAGAGATGCAACAATAACAAGAAATAATAATAATAGTAATGGAGGTTTTAGGTCTTGCCAAATACTTGAAGAAATGAAGTGGCCCCCTCCTCCTCCTCTTAGGGGAGCGTTATTAAAGGATACACAAGAAAGTGAGAAACAAGAAACTTTTGGAATTTCAATGGATGGTAGTAATGGATTTAGTGCACAACCTTCATCACAATGGAGCACTACCTTCTCTGGTTCTATCAATAATAATAACAATCAATGTCATCATCATCAACGAAGTTCTTGCAGCAGTGTTGTCTTCCCTGCTGGCCATGCCAAGTTAGATCCTCAGGTACGTGATCTAAAAAAAGAAAAGCTTGATGAGAAGAAAGGGTCATTATCAAATTTCCTAGAGCTTAAGCTAAGCCAAGACTCATTAGAAAACCAACAAAGTGAACAAGAAATCAATACTAAACTTTCTCTTTCATTGTTCTCTTCATCATCAGATTCAAGTGATTACAGACACAAAGAGATCAAGAAAACCCAGGTTGAGCGTTTATGTTTACAACAAAATTTCACACAAAGGAGTCTGTTGGGCTGA 1014 0.3757 MRGSFNLIGATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSQSRAMQQGRHQILEMYQRLNNAQGHFGVDSIINRSSNYVPPSLLIKQQPYDIKPPHHHVSSRFHPTGIFINSQMITRSSSLEDKDLSSRLYEASSHLFDVRDATITRNNNNSNGGFRSCQILEEMKWPPPPPLRGALLKDTQESEKQETFGISMDGSNGFSAQPSSQWSTTFSGSINNNNNQCHHHQRSSCSSVVFPAGHAKLDPQVRDLKKEKLDEKKGSLSNFLELKLSQDSLENQQSEQEINTKLSLSLFSSSSDSSDYRHKEIKKTQVERLCLQQNFTQRSLLG 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272005g00004 337 Gene3D - 4 41 - -
Stsc272005g00004 337 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 10 212 IPR044847 GO:0000976|GO:0006355|GO:0010158
Stsc272005g00004 337 NCBIfam myb-like DNA-binding domain, SHAQKYF class 10 40 IPR006447 GO:0003677
Stsc272005g00004 337 MobiDBLite consensus disorder prediction 190 222 - -
Stsc272005g00004 337 MobiDBLite consensus disorder prediction 196 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272005g00004 Stsc-Chr272005 20893 23501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272005g00004 10 67 G2-like Transcription Factor Family AT4G04580 54.237 2.82e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272005g00004 - - aip:107612165 427.943