Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272005g00001 TCCTCAATTAACCCATCCTTTTTTCAATTGACACCGAGACGCATAGCACAAAACAAGGAAGCTGCAGGGAAAAGCCATCTCAGAAGAAAGGGTTATGTGCAGCAACTGGAGTTTAGTAGATTAAAGCTTAAACAAGACTTTCAAAGAGCACCTTCCCAGATAG 163 0.4172 SSINPSFFQLTPRRIAQNKEAAGKSHLRRKGYVQQLEFSRLKLKQDFQRAPSQI 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272005g00001 54 PANTHER TRANSCRIPTION FACTOR TGA9 10 45 - -
Stsc272005g00001 54 Gene3D - 11 53 - -
Stsc272005g00001 54 SUPERFAMILY Leucine zipper domain 13 49 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272005g00001 Stsc-Chr272005 9319 9752 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272005g00001 9 53 bZIP Transcription Factor Family AT3G12250 64.583 5.68e-11 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272005g00001 K26729 - csv:101223216 58.9214