Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272004g00008 ATGGCCAACGCCGGCGCTGCCGCCACGTCATACTTCTTCGGCACACGCCTCACAACCCCTACACCGTCTTCTGGAAAGTTCCAAGCCTTCTTCAACCTCGGAACCAAGAAAGCACCGCCACCGCCGCCACAGAAGAAGAAGGAGCCTGCAAAGCCGGCAAAGTCCGCGAAGCCATTCTCCTCCGGCGACCGTCTCGTGTGGTTCCCGGGGGCACAGCCACCTGAATGGCTCGACGGATCCATGATCGGAGACCGTGGATTCGATCCATTTGGGCTTGCAAAGCCAGCAGAGTACCTTCAGTTTGATTTGGACTCGCTTGACCAGAACCTGGCGAAGAATGATTATGGAGAAATCATCGGAACAAGGATCGAAACGTCGGATGTGCAACCCACACCGTTTCAGCCGTACAACGAGGTTTTTGGAATTCAGAGATTCCGGGAGTGTGAAATCATTCATGGAAGGTGGGCTATGCTTGGTGCTCTTGGTGCTTTGGCCGTTGAAGCTCTCACCGGTGTTTCGTGGCAAGACGCCGGCAAGGTAATTTTTTTTTTTTCATTTTCTTTGCGAGGACATTTTCGGAGAATATTGCTTGTGTCGGTATAA 603 0.5274 MANAGAAATSYFFGTRLTTPTPSSGKFQAFFNLGTKKAPPPPPQKKKEPAKPAKSAKPFSSGDRLVWFPGAQPPEWLDGSMIGDRGFDPFGLAKPAEYLQFDLDSLDQNLAKNDYGEIIGTRIETSDVQPTPFQPYNEVFGIQRFRECEIIHGRWAMLGALGALAVEALTGVSWQDAGKVIFFFSFSLRGHFRRILLVSV 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272004g00008 200 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 45 183 IPR001344 GO:0009765|GO:0016020
Stsc272004g00008 200 SUPERFAMILY Chlorophyll a-b binding protein 62 185 - -
Stsc272004g00008 200 Gene3D Chlorophyll a/b binding protein domain 64 189 - -
Stsc272004g00008 200 Pfam Chlorophyll A-B binding protein 73 182 IPR022796 -
Stsc272004g00008 200 MobiDBLite consensus disorder prediction 19 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272004g00008 Stsc-Chr272004 52231 53215 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272004g00008 1 180 Chloroplast and Mitochondria Gene Families AT2G40100 65.556 3.91e-75 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272004g00008 K08915 - bvg:104892849 239.195