Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272002g00011 ATGGGCAAGGGCCCCTTCTCCTTCCGCCGCTCCACCTCCCGCCGCCGCCACAGGAAGATCATCGGCCCCCCAGACTCTCCGCCTGCTCCCACCTCCAGTACCGCCTTGGTCTCCGCCACCTCCCCCGCCGACAACGTCATGGTCTCCGGCGGCAGCGGCGGCGCCATCGCCATGACGAAGGTCAAGAAGAAGGCCAGCGGAGCGAGGCTGTGGATGCGGTTTGATCGGTCGGGGCGGTCGGAGCTGGTTGAGCTTGACAAGAACGCTATCATCCGCCACGCCGCAATTCCCACCAGGGACCTCAGGATCTTGGGCCCTGTCTTCTCCCACTCCTCCAATATTCTTGCTAGAGAGAAAGCTATGGTTGTTAATTTGGAGTTTATAAAGGCTATAGTCACAGCTGAAGATGTGCTATTGCTTGATCCTCTGCGCCAGGAGGTTCTTCCCTTTGTTGAACAACTCAGGCATCAACTTCCACATAAAACTCAACCTCAACTTCGTGGGCCTGCCGGTGAACAAGAAAGTGAAATGCAGGTTTCAACTGGCAGACAACGGTTGCCTGTGCCGGAGTCTGCTGAAGGGTTGCAATCTGAGCTTCCATTCGAGTTTCAGGTTTTGGAGATTGCTTTAGAAGTTGTGTGTACCTCTCTGGACTCAAGTGTGGCAGACCTTGAGAGAGGTGCTTACCCTGTATTAGATGATTTGGCTAGAAATGTTAGCACCAAGAATCTTGAACATGTGCGAAGTTTGAAGAGCAATCTTACACGTTTACTGGCACGGGTGCAGAAGGTAAGAGATGAAATTGAACATCTGTTAGATGACAATGAAGACATGGCGCAACTATATCTGACAAGGAAGTGGTTGCAGAATCAGCAACTTGATGCTCACGTGTTACCCACAACCTCGAACAACCTTTCTATTAGTCGTCGATTTGGTTCTACCAGAAGTGGAAGCCTGGTAAATAGTAACATGGGGGATGATAATGACGTGGAGGATCTGGAGATGTTGCTAGAGGCATATTTTATGCAGTTGGATGGAACTCGTAACAAGATATTGTCTGTTAGGGAGTATATTGATGACACAGAAGACTATGTCAACATCCAACTTGATAATCACAGAAACGAACTTATTCAGCTGCAGTTGACATTGACAATTGCATCATTTGCAATTGCCGTTGAAACTTTGATTGCCGGTTGCTTTGGTATGAACATTCCTTGTTCACTATATAACACACATGGAGTATTTTGGCCCTTTGTTTGGAGCACTTGTGCCGGTTGCTTACTCATTTTTCTGCTTATAATGGCATATGCAAGATGGAAAAAGTTGCTAGGATCATAA 1338 0.4836 MGKGPFSFRRSTSRRRHRKIIGPPDSPPAPTSSTALVSATSPADNVMVSGGSGGAIAMTKVKKKASGARLWMRFDRSGRSELVELDKNAIIRHAAIPTRDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEDVLLLDPLRQEVLPFVEQLRHQLPHKTQPQLRGPAGEQESEMQVSTGRQRLPVPESAEGLQSELPFEFQVLEIALEVVCTSLDSSVADLERGAYPVLDDLARNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLQNQQLDAHVLPTTSNNLSISRRFGSTRSGSLVNSNMGDDNDVEDLEMLLEAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFAIAVETLIAGCFGMNIPCSLYNTHGVFWPFVWSTCAGCLLIFLLIMAYARWKKLLGS 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272002g00011 445 FunFam magnesium transporter MRS2-4 146 376 - -
Stsc272002g00011 445 Gene3D Magnesium transport protein CorA, transmembrane region 383 443 - -
Stsc272002g00011 445 MobiDBLite consensus disorder prediction 1 36 - -
Stsc272002g00011 445 MobiDBLite consensus disorder prediction 159 188 - -
Stsc272002g00011 445 FunFam Magnesium transporter MRS2-1 59 142 - -
Stsc272002g00011 445 Coils Coil 247 281 - -
Stsc272002g00011 445 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 43 443 IPR039204 -
Stsc272002g00011 445 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 381 432 IPR045863 -
Stsc272002g00011 445 Gene3D Magnesium transport protein CorA, transmembrane region 144 376 - -
Stsc272002g00011 445 CDD Mrs2_Mfm1p-like 71 442 IPR039204 -
Stsc272002g00011 445 Pfam CorA-like Mg2+ transporter protein 332 438 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Stsc272002g00011 445 Gene3D - 55 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272002g00011 Stsc-Chr272002 69937 72343 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272002g00011 1 445 MRS2 Gene Family AT3G58970 64.823 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272002g00011 K16075 - gmx:100812561 662.914