Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272002g00010 ATGGGCAAGGGCCCCTTCTCATTTCGCCGCTCTGCCTCTCGCCGCCGTCAGAGGAAGACCGTCATCCCCTCCGACTCCCCTCCCCATCCCAATGCCGCCTTGCTCTCCACTTTGTCCATCGACAACACCTTAATCGCCTCTGGCGCTACAATTTCCCTCACCAAGGGGAAGAAGAAGACTGGCGGGGCCAGGCTGTGGATGCGGTTTGACCGGACAGGGCGGTCGGAGCTGGTGGAGCTTGACAAGAACGCCATCATCCGCCATGCCGCAATTCCCGCCAGAGATCTCAGAATCTTGGGCCCTATCTTCTCCCAATCCTCCCATATTCTTGCTAGAGAGAAAGCAATGGTTGTTAACTTGGAGTTTATAAAGGCTATAGTCACAGCTGAAGATGTGCTATTGCTTGATCCTCTACGCCACGAGGTTCTTCCGTTTGTTGAACAACTCAGGCAACAGCTTCAACATAAAATTCAACCTAAACTTAGTGGGCTTGCAGGTGAACAAGAAAGCGAAATGCGGGTTTTGAGTGGCAGACAATTGTTGCCGGTGCCAGAGTCTGCTGAAGGGTTTCAATCTGAGCTTCCATTTGAGTTTCAGGTTTTGGAGATTGCTTTAGAAGCTGTGTGTACCTCCCTGGAGTCAAGTGTTGCAGACCTCGAGAGAAATGCTTACCCTGTATTAGATGATTTGGCTAGGAATGTTAGTACCAATAATCTTGAACATGTGCGAAGCTTGAAGAGCAATCTTACTCGTTTGTTGGCACGAGTGCAGAAGGTACGTGATGAAATTGAACATCTGTTGGATGACAATGAAGACATGGCGCAACTATATTTGACAAGGAAGTGGCTGCAGAATCTGCAGCTTGATGCTCATGTTGGGGCCACACCCTCGAACCACCCTTTAATTAGTACTCACACAAACAGCATCTTTGGAGAAGATAATGACGTGGAGGATCTGGAGATGTTGCTTGAGGCATATTTTATGCAGTTGGATGGAAGTCGCAACAAGATATTGTCGGTTCGGGAGTATATTGATGATACAGAAGACTATGTCAACATCCAACTTGATAGTCACAGAAACGAACTTATTCAGCTGAATTTAACATTGGTCATCGCGTCATTTGCAATGTCTATTGAAAATTTGGTGGCCGGTACATTTGGTATGAACATTCCTTGTTCACTATTTGAAGCGGTTGAGCTTGACAGGAACGGCATCATCCGCCACGCCGCAACTCCCACCAGGGATCTCATGATCTCGGGCCCTGTCTTCTCCCACTCTTCCAATATTCTTGACCTTGAGAGAGGTGCTTACCCTGTATTAGATGACTTGGCTACAAGTGTTAGCACCAAGAATCTTGAACATGTGCGAAATTTGCAGAGCAATCTTACACGTTTGGTGGCACAGGTGCAGAAGGTACGAGATGAAATAGAAAATCTGTTAGATGACAACGAAGACATGTTGCAACTATATTTGACAAGGAAGTGGTCGCAGAATCAGCAACAACTCGATGCTCACGTGGGGGGCACAACCTCCAACAACATTTCTATTACTCGTCGATTTAGTTTTGCCAGAAATGGAAGTCTGTTGGATGGAACTCATAACAAGACATTGTTATATCGGTTTTATGATTTTTGA 1635 0.4654 MGKGPFSFRRSASRRRQRKTVIPSDSPPHPNAALLSTLSIDNTLIASGATISLTKGKKKTGGARLWMRFDRTGRSELVELDKNAIIRHAAIPARDLRILGPIFSQSSHILAREKAMVVNLEFIKAIVTAEDVLLLDPLRHEVLPFVEQLRQQLQHKIQPKLSGLAGEQESEMRVLSGRQLLPVPESAEGFQSELPFEFQVLEIALEAVCTSLESSVADLERNAYPVLDDLARNVSTNNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLQNLQLDAHVGATPSNHPLISTHTNSIFGEDNDVEDLEMLLEAYFMQLDGSRNKILSVREYIDDTEDYVNIQLDSHRNELIQLNLTLVIASFAMSIENLVAGTFGMNIPCSLFEAVELDRNGIIRHAATPTRDLMISGPVFSHSSNILDLERGAYPVLDDLATSVSTKNLEHVRNLQSNLTRLVAQVQKVRDEIENLLDDNEDMLQLYLTRKWSQNQQQLDAHVGGTTSNNISITRRFSFARNGSLLDGTHNKTLLYRFYDF 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272002g00010 544 Gene3D Magnesium transport protein CorA, transmembrane region 422 513 - -
Stsc272002g00010 544 Gene3D Magnesium transport protein CorA, transmembrane region 140 362 - -
Stsc272002g00010 544 Gene3D - 50 137 - -
Stsc272002g00010 544 CDD Mrs2_Mfm1p-like 66 397 IPR039204 -
Stsc272002g00010 544 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 431 497 IPR039204 -
Stsc272002g00010 544 FunFam Magnesium transporter MRS2-1 54 137 - -
Stsc272002g00010 544 Coils Coil 455 489 - -
Stsc272002g00010 544 MobiDBLite consensus disorder prediction 1 28 - -
Stsc272002g00010 544 FunFam magnesium transporter MRS2-4 141 362 - -
Stsc272002g00010 544 Coils Coil 242 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272002g00010 Stsc-Chr272002 56615 64679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272002g00010 428 516 MRS2 Gene Family AT3G58970 64.045 4.08e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272002g00010 K16075 - gmx:100812561 568.155