Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc272000g00001 | ATGCTTCTAATTATGCGTGTAAAGCTGAGAACAGTGAATGTTACACTTCAAGCAGTAGACTTGGTTACCTTTGCAACTGCTCTACTGGTTTTCAGGGAAATCCTTATCTCCTTCGTGGTTGCCAAGTCATGTGATAGTGCAAGTAGTAGGTGTGTGTGTGGAAGGGAGAGGGGATCCGACAAGGCGGCAACAAAGATGATGAAGATGGCTAATGGTAATAAGGATGGTGAGCAAGAGGAAGTAAATGATTGTTCTGGTGGAGCGATATGCAAGAACGTACCTGGTAGCTGTAAGTGTTCATGTCCAAAAGGATATGTTGGAAATGGGAAAGAAAATGGAACAAGATGCACTCGTAAGTCCAGGGCAGAAATCATTTTAATCATTGCATTGGGTGTCAGTGTTGGTGTCATAACAATACTTGTGATAAGCTTTCTTGTGTATTGGAGAATGAAGGAAACGAGGCTAAATAAACTTAAGGAACAGTTTTTTCAACAAAATGGTGGCTTTATCCTACTGCAACACATTTCAAGGCTTAGAGGGTCAATAGAAACAGCTAAAGTCTTCACTGAGGAAGAATTAAAGAAGGCCACCAACAACTTTGATGAAGCCAAGATCTTAGGCAAAGGGGGTCAAGGAACAGTTTATAAAGGATTACTCCCAGACAATAGAACCGTTGCAATTAAAAAATCCAAAATCAGTGACTCAAGCCAAGTTGAGCAATTCATCAATGAAGTTGTGTTGCTTTCCCAAATCAACCATAGAAATGTGGTTAGACTCTTAGGTTGTTGCTTAGAGACAGAAGTGCCTTTGCTTGTCTATGAGTTCATCCCCAATGGTACCATTTTTCAACATCTTCATGGTGATAACCAATCTTTCAAACTTACTTGGGCAACAAGATTGAGAATAGCAATAGAAACTGCTGGGGCCTTAGCATACTTGCACTCTGGTATTTCTATGCCAATCATACACAGAGACATCAAAACTACAAATATTCTTCTTGATGCTCATCTCACGGCAAAGATTTCTGATTTCGGAGCTTCAAAGATTGTTCCTCTTGATCAAACTGAATTAACCACTTTGGTGCAGGGGACAATGGGTTATCTTGACCCTGAATACATGCACACCAGCCAGTTAACTGAGAAAAGTGATGTTTATAGTTTTGGAGTCGTCCTAGCAGAGCTTCTGACAGGAAAGAAGGCACTCTCTTTCACTGATCCAGAGGTTAGAAACCTTGTGGCATACTTTGGTAGTTCAATGGAAGAAGGGCGGTTACTTGAGATTGTGGACAAACATATCATAAATGAGGCAAAGGTTGAGCACCTTATGGAATTTGCCAATGTTGCAAAGCAGTGTTTGAGAGTGAAGAGGGAAGAAAGGCCTACCATGAAAGAAGTTGCATTAGAACTTGAGGGACTTAGGGTAGTAGCTGGAGAGAAACACCGATGGGAAAATAGTGACAAATCATGTTCAGAAGAGACTAAAAGCTTGTTAAAAGTACCATCATCCTCTGTCTCTGTCTCTGATGTTGAAAGTTTTAAGTTTGATAGCATAAGTCAGGTTTCTATGTCACTGGTGGGTGGTGGAAGATGA | 1590 | 0.4075 | MLLIMRVKLRTVNVTLQAVDLVTFATALLVFREILISFVVAKSCDSASSRCVCGRERGSDKAATKMMKMANGNKDGEQEEVNDCSGGAICKNVPGSCKCSCPKGYVGNGKENGTRCTRKSRAEIILIIALGVSVGVITILVISFLVYWRMKETRLNKLKEQFFQQNGGFILLQHISRLRGSIETAKVFTEEELKKATNNFDEAKILGKGGQGTVYKGLLPDNRTVAIKKSKISDSSQVEQFINEVVLLSQINHRNVVRLLGCCLETEVPLLVYEFIPNGTIFQHLHGDNQSFKLTWATRLRIAIETAGALAYLHSGISMPIIHRDIKTTNILLDAHLTAKISDFGASKIVPLDQTELTTLVQGTMGYLDPEYMHTSQLTEKSDVYSFGVVLAELLTGKKALSFTDPEVRNLVAYFGSSMEEGRLLEIVDKHIINEAKVEHLMEFANVAKQCLRVKREERPTMKEVALELEGLRVVAGEKHRWENSDKSCSEETKSLLKVPSSSVSVSDVESFKFDSISQVSMSLVGGGR | 529 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc272000g00001 | 529 | Gene3D | Phosphorylase Kinase; domain 1 | 173 | 275 | - | - | |
Stsc272000g00001 | 529 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 66 | 484 | IPR045274 | GO:0007166 | |
Stsc272000g00001 | 529 | Gene3D | Green fluorescent protein | 84 | 157 | IPR009017 | - | |
Stsc272000g00001 | 529 | Coils | Coil | 186 | 206 | - | - | |
Stsc272000g00001 | 529 | FunFam | Wall-associated receptor kinase 2 | 276 | 494 | - | - | |
Stsc272000g00001 | 529 | FunFam | Wall-associated receptor kinase 2 | 170 | 275 | - | - | |
Stsc272000g00001 | 529 | CDD | STKc_IRAK | 206 | 472 | - | - | |
Stsc272000g00001 | 529 | Pfam | Protein kinase domain | 201 | 465 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc272000g00001 | 529 | ProSiteProfiles | Protein kinase domain profile. | 200 | 483 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc272000g00001 | 529 | SMART | egfca_6 | 80 | 117 | IPR001881 | GO:0005509 | |
Stsc272000g00001 | 529 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 321 | 333 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc272000g00001 | 529 | SMART | serkin_6 | 200 | 472 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc272000g00001 | 529 | SUPERFAMILY | Protein kinase-like (PK-like) | 183 | 469 | IPR011009 | - | |
Stsc272000g00001 | 529 | Gene3D | Transferase(Phosphotransferase) domain 1 | 276 | 495 | - | - | |
Stsc272000g00001 | 529 | CDD | EGF_CA | 79 | 107 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc272000g00001 | Stsc-Chr272000 | 17056 | 65987 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc272000g00001 | 34 | 529 | Receptor kinase-like Gene Family | AT1G21230 | 48.649 | 3.02e-156 | 461 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Stsc272000g00001 | Pkinase | 4.8e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc272000g00001 | - | - | aip:107607783 | 628.246 |