Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271g00008 ATGGCGGACAAGGCCGTTACCATCCGAACCAGGAAATTCATGACAAACAGGCTCCTCTCCAGGAAGCAATTCGTCATTGATGTTCTTCATCCAGGCAGGGCAAATGTTTCCAAGGCCGAGTTGAAGGAGAAGCTGGCAAAGATGTATGACGTGAAGGATCCCAACACCGTGTTTGTCTTCAAATTCCGTACAAATTTTGGTGGTGGCAAATCCACTGGCTTTGGTTTGATTTATGATTCTGTTGACAATGCAAAGAAGTATGAGCCTAAGTACAGGCTTATCAGGAACGGGCTTGATACTAAGGTAGAAAAGTCAAGGAAACAAATGAAGGAGAGGAAGAATAGAGCTAAGAAGATTCGTGGAGTCAAGAAGACCAAGGCTTCTGATGCTGCCAAAAAGAAATGA 405 0.442 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLAKMYDVKDPNTVFVFKFRTNFGGGKSTGFGLIYDSVDNAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKKTKASDAAKKK 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271g00008 134 MobiDBLite consensus disorder prediction 110 134 - -
Stsc271g00008 134 ProSitePatterns Ribosomal protein S24e signature. 66 88 IPR018098 -
Stsc271g00008 134 FunFam 40S ribosomal protein S24 1 134 - -
Stsc271g00008 134 Hamap 30S ribosomal protein S24e [rps24e]. 4 106 IPR001976 GO:0003735|GO:0005840|GO:0006412
Stsc271g00008 134 MobiDBLite consensus disorder prediction 102 134 - -
Stsc271g00008 134 Pfam Ribosomal protein S24e 25 103 IPR001976 GO:0003735|GO:0005840|GO:0006412
Stsc271g00008 134 PANTHER 40S RIBOSOMAL PROTEIN S24 1 131 IPR001976 GO:0003735|GO:0005840|GO:0006412
Stsc271g00008 134 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 6 108 IPR012678 GO:0003735|GO:0005840|GO:0006412
Stsc271g00008 134 Gene3D - 1 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271g00008 Stsc-Chr271 38162 39463 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271g00008 1 133 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 85.714 1.68e-83 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271g00008 K02974 - gmx:100499852 236.498