Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271g00005 ATGATGGCATCGGAGCAACACGACACCGTTTTCCCAGACATGGACGACGATGACGAGGAGTCCCAAGAGGACGAAGAAGAGGAAGACATCGACGACGACGACGTTTTGCCCGACGACGAAGAAAACGAGCCCTCTCCCTCCACCTCCTCTGCCGCCCTTGCCGTCACCGTCGCCGTTCCCTCCGCTGCCATCCCCAACGGCGAAAATGCTCCAATTACAACCCCTACCGCCAACGCGGCCACCACCGTGGTCGTTTCCCTCGAAGGCAGCTCCTCCGATCCGAAACGGCAGCAGCAAATCGAGGAGAAGAAGCCGCTCGACGATTCCCGGAGGCTGTTCCAGCGGCTGTGGACCGACGAGGATGAGATCGAGCTCCTGCAAGGATTTCTCGACTACACATCGCAGCGAGGGTCGTCTCACCACAACGACACCGCCTTGTTCTACGACCAAATCAAGTCGAAGCTGCAGCTGGATTTCAACAAGAACCAGCTGGTGGAGAAGATCCGGAGGCTGAAGAAGAAGTACCGCAACGTTCTCAACAAGATTGGTTCCGGTAAGGAATTCAACTTCAAGAGTGCTCACGATCAAGCCACCTTCGAGATTTCACGCAAGATCTGGAGCAATTTGGGCCCAGTCGCTGATAATGCCTTGGATGACGACGAAATCAACCTCAATCCCAATCCTAACCCTAACCCTAACCTCAATTTTACCTTCGCACTCCCCGCCGCGCCCAGGACTGAGCCGCTCTTCGGGAATTCCTCCGAGAAGAAAACGCCGCCTTCGCGGAAGCGATCGCGGCCTCGATCATCGGCTGCTGCGACGACTACGGTGAAAATTGAAGAGAGGCGCGAGTCAATGGATGGATCTGCGTCACATAAAGAACATAACTTTAATCTCAACGCTGCCGCTACAGGTCTCCCTGCAACGCAGAACAATAACTGTGAGAGTAACAAGTGTAGCAGTGGATATGGTATACCAGGTTTGGTTGAAGAGACGGTTAGGAGTTGTTTGTTGCCGTTGGTGAAGGAATTGGTGGGTGGCGCTTCCATGGGAGGTGGTCACTTTGGCGGAAGAGGGTCCGGAGGGTTTTCACTGAACCCCATACCGTTGGGGTTTGGAGCAATGAATAATTTGGGTATGGGTTTGGGTACGGGTATGGGTATGGGTTTGGGTGGTGGGGAAGTGGTGGATGAAAGATGGAGGAAGCAGCAGATATTGGAATTGGAAGTGTACTCCAAGAGGCTGGAACTGGTTCAGGAACAGGTCAAAGCTGCTCTTGAGGAATTGAGGTCAACGGCAGGGAGCTGA 1308 0.5405 MMASEQHDTVFPDMDDDDEESQEDEEEEDIDDDDVLPDDEENEPSPSTSSAALAVTVAVPSAAIPNGENAPITTPTANAATTVVVSLEGSSSDPKRQQQIEEKKPLDDSRRLFQRLWTDEDEIELLQGFLDYTSQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKIGSGKEFNFKSAHDQATFEISRKIWSNLGPVADNALDDDEINLNPNPNPNPNLNFTFALPAAPRTEPLFGNSSEKKTPPSRKRSRPRSSAAATTTVKIEERRESMDGSASHKEHNFNLNAAATGLPATQNNNCESNKCSSGYGIPGLVEETVRSCLLPLVKELVGGASMGGGHFGGRGSGGFSLNPIPLGFGAMNNLGMGLGTGMGMGLGGGEVVDERWRKQQILELEVYSKRLELVQEQVKAALEELRSTAGS 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271g00005 435 MobiDBLite consensus disorder prediction 11 41 - -
Stsc271g00005 435 MobiDBLite consensus disorder prediction 1 54 - -
Stsc271g00005 435 PANTHER BNAANNG10740D PROTEIN-RELATED 15 428 IPR007592 GO:0006355
Stsc271g00005 435 Pfam Protein of unknown function, DUF573 113 207 IPR007592 GO:0006355
Stsc271g00005 435 MobiDBLite consensus disorder prediction 245 292 - -
Stsc271g00005 435 Coils Coil 408 432 - -
Stsc271g00005 435 Coils Coil 161 181 - -
Stsc271g00005 435 MobiDBLite consensus disorder prediction 277 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271g00005 Stsc-Chr271 27064 28371 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271g00005 2 431 GeBP Transcription Factor Family AT5G28040 42.004 1.04e-88 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Stsc271g00005 DUF573 1.6e-34 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271g00005 - - gmx:100790030 395.971