Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271997g00008 ATGGAAAACACAGAAGATCCAACGAATGTTTATGTTCCGGTCATACTTCAGAGCGACAAGTTAGCAAAGTATATAGTGGAAACTGCTGCTTACCCTCGCGAGGCACAGCTTCTTAAAGAGCTAAGGGAACGAACTGAGAATTATCCTAGGGGCAATATGGGTACAAGTCCTGATTCAGGCCAACTAATCTCAATATTGTTGAAGCTATTGAATGCCAAAAAGACAATTGAAATTGGAGTGTTTACAGGCTACTCTCTTCTTCTTACAGCTCTTAACATTCCTCATGATGGAAAGATTACAGCCATAGATATTGACAGAAAAGCTTATGAGGTTGGTTTACCATTTATCAAAAGGGCTGGCGTAGAGCAGAAGATTGATTTTATAGAGTCTCCAGCACTACCAATTTTGGACAAACTAGTGCAAGATCCTTCAAACTTGGGAACATATGACTTTGCCTACATTGATGCTGACAAATGGAGCTACATGAACTACCATGAGAGGCTCATAAAACTGGTGAAGGTTGGTGGGTTGCTTGTGTATGATGACACACTCTTAGGTGGATTTGTTGTGTGGCCTGAAGAGGATGTTGAAGCTGTTCTCAGACCATACAGAAAAGCTGCCATTGAAGTCAACCAAGCACTCGCCAATGACCCTCGCGTTGAGATCGCTCTTACTCCTGTAGGAGATGGACTCACCATTTGCAGGCGCATTGCATGA 717 0.4268 MENTEDPTNVYVPVILQSDKLAKYIVETAAYPREAQLLKELRERTENYPRGNMGTSPDSGQLISILLKLLNAKKTIEIGVFTGYSLLLTALNIPHDGKITAIDIDRKAYEVGLPFIKRAGVEQKIDFIESPALPILDKLVQDPSNLGTYDFAYIDADKWSYMNYHERLIKLVKVGGLLVYDDTLLGGFVVWPEEDVEAVLRPYRKAAIEVNQALANDPRVEIALTPVGDGLTICRRIA 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271997g00008 238 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 14 237 IPR002935 GO:0008171
Stsc271997g00008 238 CDD AdoMet_MTases 76 185 - -
Stsc271997g00008 238 PANTHER O-METHYLTRANSFERASE-RELATED 14 237 - -
Stsc271997g00008 238 Pfam O-methyltransferase 27 237 IPR002935 GO:0008171
Stsc271997g00008 238 Gene3D Vaccinia Virus protein VP39 7 238 IPR029063 -
Stsc271997g00008 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 19 236 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271997g00008 Stsc-Chr271997 58957 61349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271997g00008 15 237 Monolignol Biosynthesis Gene Families AT4G26220 56.951 5.15e-94 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271997g00008 K00588 - gmx:100800911 328.946