Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271995g00013 ATGCCTTCTTCAGCACCCACTTTGGTTTCAAAATGCACCATCTTCCCACACCAAAAATCCTCACTCCCAAAACTCAAACTCTCAGTTTCAGACCTTCCTATGCTCTCCTGCCACTACATCCAAAAGGGATGCCTCTTCACCCAACCCACTTCCCTCTCTTCTAACACACTAATTCCACTCTTGAAATCTGCCCTCTCAAGAACCCTCTCCCTCTTTCCCCCTCTCGCCGGCCGTTTAACCACTGACTCCGACGGTTATGTCTATATCTCCTGCAACGACGCCGGCATCGATTTCCTCCACGCCTCCGCACCCGCTCTCAACGTCCTTGATCTTCTCTCTCCCCTGGACGTTCATAAATCTTTCAGAGAATTCTTCACCTTCGATAGGAAGGTTAGTTACAGCGGTCATTACTCTCCGATTATGGCCGTTCAGGTCACCGAGCTCGCCGACGGCTTCTTCATCGGAATTTCCGTCAACCACGCCGTCACCGATGGAACCTCCTTCTGGAATTTCTTCAACACATTCGCTCAGGAATGCAGGGGAGCCAGTAAGAGTATCCGTAATGTTCCTGACTTCCACCGCAACAGTGTGCTCATCTCCGACGCAGTCCTCCGCCTGCCGGAGGGAGGGCCGAAGGTGACGTTCAACGCGGACGCGCCAATTAGGGAGAGAATCTTCAGCTTTAGCCGCGAAGCAATTCAGAGGCTTAAAGCAAGAGCTAACAACAGAAAATGGACGGAAGGGGTTAACTCTGTTGAGCTGTTACGGAAAAAGAGCAACGACAATCTTCTACAAAAAGATAACGGTAACGGTAAGGTAACCGCCCTCCTCGACAATTGGTTCAAGAGCGCGGTTGAAACAGAAACGGTTACAACGGTCGAGATTTCGTCGTTTCAATCCGTATGCGCGCTGCTGTGGCGTGCGGTCACGCGCGCAAGGAAATTGCCTGTTTCCAAAACGACAACGTTTAGAATGGCGGTTAACTGTCGCCACCGGATAGAGCCGAAATTGGACCCTTTCTACTTCGGAAACGCGATTCAGAGCATTCCGACCTACGCCACCGCCGCTGATGTGCTCTCGCATGATCTGCGCTGGTGCGCTGAGCAGCTCAACAAGAACGTTAGGGCTCACAACGACGATACGGTCCGGCAGTACGTGGAGGATTGGGAATCGAACCCGCGGTGTTTTCCGCTGGGAAACCCCGACGGCGCGTCGATCACGATGGGAAGCTCGCCGAGGTTTCCGATGTATGACAATGACTTCGGTTGGGGAAGACCGTTGGCGGTGAGGAGCGGTGGCGCGAACAAGTTCGACGGCAAGATTTCGGCCTTTCCGGGAAGAGACGGAAGCGGCACGGTGGATTTGGAGGTGGTTTTAGCTCCGGAGACGATGGCGGGTTTGGAGTCTGATCCTGAGTTCATGATGTACGCTACTAGACAGTTATGA 1446 0.5297 MPSSAPTLVSKCTIFPHQKSSLPKLKLSVSDLPMLSCHYIQKGCLFTQPTSLSSNTLIPLLKSALSRTLSLFPPLAGRLTTDSDGYVYISCNDAGIDFLHASAPALNVLDLLSPLDVHKSFREFFTFDRKVSYSGHYSPIMAVQVTELADGFFIGISVNHAVTDGTSFWNFFNTFAQECRGASKSIRNVPDFHRNSVLISDAVLRLPEGGPKVTFNADAPIRERIFSFSREAIQRLKARANNRKWTEGVNSVELLRKKSNDNLLQKDNGNGKVTALLDNWFKSAVETETVTTVEISSFQSVCALLWRAVTRARKLPVSKTTTFRMAVNCRHRIEPKLDPFYFGNAIQSIPTYATAADVLSHDLRWCAEQLNKNVRAHNDDTVRQYVEDWESNPRCFPLGNPDGASITMGSSPRFPMYDNDFGWGRPLAVRSGGANKFDGKISAFPGRDGSGTVDLEVVLAPETMAGLESDPEFMMYATRQL 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271995g00013 481 Gene3D - 7 205 IPR023213 -
Stsc271995g00013 481 SUPERFAMILY CoA-dependent acyltransferases 36 183 - -
Stsc271995g00013 481 Gene3D - 220 471 IPR023213 -
Stsc271995g00013 481 Pfam Transferase family 7 474 - -
Stsc271995g00013 481 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271995g00013 Stsc-Chr271995 84340 86141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271995g00013 23 468 Monolignol Biosynthesis Gene Families AT5G48930 27.473 1.13e-36 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271995g00013 - - gmx:100500612 762.681