Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271994g00010 ATGGCACCTCTTAATATTCATTTGAAAGATGTAGTGTTTATCACACCATCTAAGTCCACTCCTTCCTCTATTCTTTCTCTATCAACACTTGACAACATACCTGACCACAATAGCCTATGTCAAACCATTCATGTTTACAAATCATCATCACAAAAACATGGTGATTACCCAAATGACCAAATTGACCCTAACCCTATTAATGTGATCAAAGAAGCACTCTCTAAGGCTTTGTTCTATTACTACCCTCTTGCCGGGAGGCTAGTGAAACATGTTGATGGGAAGTTTAGGGTTCATTGCAATCCCAACATTGGGGCTCCATTTGTGGAGGCAATTGCTGATTGCAATCTCTCTTCTCTTGATTACCTTGATGGTAGTGATTATGAAATTGCAAAGCTCTTTGCCTTTAATATTCCTTCACAAGAAGAAGAAAGTATTAAACAATACCCTCTAGGGTTCAAGGTGACAAAATTCTTATGCGGCGGATTCGCCATTGGCATGGCGGTTTCACATGTTGTCATTGATGGATGTGGAGCATCTCAATTCTTAAGAGCCATTATTGAATTAGCAAGCGGGAGAAACGAACCTTCGGTGAAGCCTGTCTGGGAAAGAGAAAGGCTAATTGGGTCATTTACAAATACACCATTGCCTAGTCTCATGGATGGTCCTTCCGTCGCGAGTTCACCATATCTTCCTTCCAAAACACTTGTGCATGGATGTTTTAAGCTGGATGATGAGAACATAAAAAAACTCAAGATGAGTTTGATCAAGGAATTCAACAACAATGTTATTGAAACCACAAAAGAAAACATGATCATCACAAGTTTTGAATCGCTTTCGGCTTACGTTTGGAGGGCAAGAGCTAGAGCCCTAAAACTAAGCTATGATGGGAAAACAATGCTTAGTGTGATAGTGGGAATTAGAAGGCATTTGTTTGATCCTCCTTTGCCAGAAGGGTATTATGGGAATGCAATTGTGGATGCAAATGTTGTCTTGAGTGTGAAGGAACTCAATGAGAAGCCACTCTCACAAGTTGTGAAGCACATCAAGGAGAGCAAGAAGGTTGCTTTTACAAAGGATTATATTAGGGATTCAATTAACACCTTTGAGTCAACAGTTGAGGACTTTGATGTGGAAGGTAGTGGTGCATTCATGAGTTTGACTGATTGGAAGCATTTAGGGTTCTTGGAGAAATTGGATTTTAGAGGGAATATGTTGGTGAATGCATTACCTTCTCCATGCAACATGTTTGGGTCAGTTGGTTTGTGCATTTTTGCACCACTTAGTAACATTGATTCATCAATGAAAGGGGGAGTTAGGGTTTTTGTGTCACTCCCCAATGATGCCATGCCCAAGTTTAGGGAGGAGATGGAAGCACTTAGGCTTATTAATTAA 1392 0.4023 MAPLNIHLKDVVFITPSKSTPSSILSLSTLDNIPDHNSLCQTIHVYKSSSQKHGDYPNDQIDPNPINVIKEALSKALFYYYPLAGRLVKHVDGKFRVHCNPNIGAPFVEAIADCNLSSLDYLDGSDYEIAKLFAFNIPSQEEESIKQYPLGFKVTKFLCGGFAIGMAVSHVVIDGCGASQFLRAIIELASGRNEPSVKPVWERERLIGSFTNTPLPSLMDGPSVASSPYLPSKTLVHGCFKLDDENIKKLKMSLIKEFNNNVIETTKENMIITSFESLSAYVWRARARALKLSYDGKTMLSVIVGIRRHLFDPPLPEGYYGNAIVDANVVLSVKELNEKPLSQVVKHIKESKKVAFTKDYIRDSINTFESTVEDFDVEGSGAFMSLTDWKHLGFLEKLDFRGNMLVNALPSPCNMFGSVGLCIFAPLSNIDSSMKGGVRVFVSLPNDAMPKFREEMEALRLIN 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271994g00010 463 Pfam Transferase family 12 458 - -
Stsc271994g00010 463 PANTHER ACYL TRANSFERASE 4 8 457 - -
Stsc271994g00010 463 Gene3D - 2 214 IPR023213 -
Stsc271994g00010 463 Gene3D - 223 456 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271994g00010 Stsc-Chr271994 65813 67204 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271994g00010 4 369 Monolignol Biosynthesis Gene Families AT5G48930 28.571 1.77e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271994g00010 K20240 - gmx:100801843 479.944