Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271994g00008 ATGGCGTATGATCAAATTACCTCCTTCAAGATTGAAAACAAAGATGTTGAATATGTGAAACCATCAAAACCTACTCCTTCCACTACACTTTCTCTATCCACAATTGATAATAGGCCTGAATTCCTTTCCCTAAGTCAAGCCATTCGTGTATACCAATCACAAAATAACAATTCCAAAAAAGACCCTGCAATGGTAATCAAAGAAGCACTATCTAAGGCTTTGGTTTATTACTACCCTCTAGCTGGCAAGCTAGTGAAGCCTCATCATAACAATGGGAAGGTAACAATCAATTGCAATGAAGATGGAGTTCCATTTTTAGAGGCAATTGCAAATTGTGACCTTTCTTCACTCAATTATCTTGATTTGAGTGACATTGGAATTGCAAAAAACTTTGTGTATGATCCCCCTTCTCTTCAAGATGATAAGGGTAACCATCTAATATACCCTATGGTGGTGAAGGTGACTAAGTTTCAATGTGGAGGGTTCACATTAGGGTTAGGAGAACCTCATGCTGTTGCTGATGGGAGCGGCTCTATTAAGATCTTTCAAGCCGTAGCCGAAATCGCGAGCGGGCAAACTGAGCCTTCGGTGAAGCCCGTTTGGGAAAGAGAAAGACTCAATGGGTCAATAACCAAGACACCGTTATTGAGTCTCATGGATGGAGCTTCGGCCGCGGGTTCACCATATCTACCCTCCAAAACCCTAGTCCATGAATGTTTTAAGGTGGATAGTGAAAGCATAAAGAGACTCAAATTGAATTTGGCAAAGGAGATTCTTGGCAATAATGTTCAAGTTGCAAATGATGAATTGAATTTCACAAATTTTGAGTCTCTTGCTGCTTATGTTTGGAGGGCAAGAACTAGGGCATTGAAATTGAACTATGATGGTAAAACTATGCTGAAATTTGCGGTAGGGATAAGAAGGCACTTAAATCCTCCTTTGCCCGAAGGGTATTATGGTAATACCATTGTAGATGCTGATGTTGTTTTGCCGGTTAAAGAAGTCAATGAAAAACCACTCTCACATGTGGTGAAGATTATTAAAGAGTTCAAGAAGGTTGCTTTCACAAAAGAATTTATCAAGAAATCAATTGATACTTTGGAGACAAGAGTGGAGGAGTTTGATTTTGATGGAAATGGTTCATGCATGGCTTTGGCTGAGTGGAAGCATTTAGGGTTCTTGGCAAACATGGATTTTGGATGGAAGGAGCCTGTGAATTTGATACCTGCCCCATGTAATATGTTTGAGAAAGTGAGTATTTGCATTTTCTTTCCTCCTAGTGACTTGGATACTTCAATGAAGGGAGGTGTTAAGATTTATGTCTCACTCCCCATTGATGCCATGCCCAAGTTTAGGGAAGAGATGAAAGCTCTTACAATCATTAATTAA 1389 0.3974 MAYDQITSFKIENKDVEYVKPSKPTPSTTLSLSTIDNRPEFLSLSQAIRVYQSQNNNSKKDPAMVIKEALSKALVYYYPLAGKLVKPHHNNGKVTINCNEDGVPFLEAIANCDLSSLNYLDLSDIGIAKNFVYDPPSLQDDKGNHLIYPMVVKVTKFQCGGFTLGLGEPHAVADGSGSIKIFQAVAEIASGQTEPSVKPVWERERLNGSITKTPLLSLMDGASAAGSPYLPSKTLVHECFKVDSESIKRLKLNLAKEILGNNVQVANDELNFTNFESLAAYVWRARTRALKLNYDGKTMLKFAVGIRRHLNPPLPEGYYGNTIVDADVVLPVKEVNEKPLSHVVKIIKEFKKVAFTKEFIKKSIDTLETRVEEFDFDGNGSCMALAEWKHLGFLANMDFGWKEPVNLIPAPCNMFEKVSICIFFPPSDLDTSMKGGVKIYVSLPIDAMPKFREEMKALTIIN 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271994g00008 462 Gene3D - 230 455 IPR023213 -
Stsc271994g00008 462 Gene3D - 5 216 IPR023213 -
Stsc271994g00008 462 PANTHER ACYL TRANSFERASE 4 9 457 - -
Stsc271994g00008 462 Pfam Transferase family 10 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271994g00008 Stsc-Chr271994 40747 42135 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271994g00008 10 453 Monolignol Biosynthesis Gene Families AT5G48930 27.412 2.13e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271994g00008 K20240 - gmx:100783730 472.626