Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271994g00003 ATGGCAAATAAAGCAGAAGAACTCCTTAAGCTTAACATGCATGATATTATACTTGTGAAACCATCAAAACCCACTCCTTCATCTATTCTTTCTCTATCCACAATTGACAATAGACCTGAACTAAGTATTAATACACTATGCCAAACAATTCACACATTCCAGTCACCAAATAACATTACCCAAAAAGATCCTGCACTTGTGATTAAAGAAGCACTCTCAGAGGCATTGTTCTATTACTACCCTCTTGCTGGGAGGTTGGTAAAGCATACTGATGGAAAACTTCGAATCCATTGCAATGCATATGGAGTTCCATTTGTGGAAGCCACTGCCAATTGCATGCTTTCTTCCCTTAACTACCTTGATGGTTGTGACAGGGAAAATGCAAAACACTTTGCCTTTGATGTTCCTCTTGATGAAGAAGATGATGAAAATGGTAACCAATATCCGTTGAGGATAAAGGTAACCAAGTTTCATTGCGGCGGGTTTACAATTGGACTGTGCACATCGCATGCTGTTTTCGATGGGAATGGAGCATCTCAATTCTTTCAAGCCTTAGCTGAATTGGCAAGTGGAAAAAGCGAGCCATCAGTGAAACCTGTGTGGGAGAGGGAAAGGCTAAATGGGTCAATTACTGAACATCCATTGCAAAGTCCTATGGATAACATCTTAGACGCTGTTTCACCTTATTCATCAACCACAACACTTGTGCATGAATGTTTTAAGGTGGATATTGAGAGCATTAAAAGACTGAAAATGAGTTTATCCAAGAAAGTTAGTGACTACTCTTTGGAGGGTGAAAGCTTTACAAGTTTTGAAGCCCTTGGTGCTTATGTTTGGAGGTCGAGAACTAGAGCCTTGAAACTCAACTATGATGGAAAAACTACATTGGCTATTATGGTAGGGCTAAGGAAGAATCCCTCGTTCATTCCTCCTGTGCCTGAAGGATATTATGGGAATGCTTTTGTGGATCCAAAGGTTGTGCTAACTGTAAGGGAACTGAATGAAAAGCCACTCTCACATGTTGTGAAGATGATTAAGGAGGCTAAGAAGCTTGGTTTCTCAAAGGAGTACATTAGGAATGTTATTGACACATTGGAGACAAACAAAAAAGAGCCCTTTTATCATCAAGGTATTGGTGCATCTATGGTTTTGACTAGTTGGTTGCATTTGGGCATGGAAAACATGGATTTAGGATGGGCTAAGGTAGTGAACATGATACCGGCACCATGCAACACGTTTGGGACAGCTGGAATGTGTGTTTTCTCAGAACCTAGTGACTTGGATCCTTCAATGAATGGAGGTGTTAGGATCTTTGTTTCTCTACCTAGTGATGCTATGCCCAAGTTCAAGGAGGAGATGGAAGCTCTCAAGCTTGTTAAACCATAG 1386 0.4069 MANKAEELLKLNMHDIILVKPSKPTPSSILSLSTIDNRPELSINTLCQTIHTFQSPNNITQKDPALVIKEALSEALFYYYPLAGRLVKHTDGKLRIHCNAYGVPFVEATANCMLSSLNYLDGCDRENAKHFAFDVPLDEEDDENGNQYPLRIKVTKFHCGGFTIGLCTSHAVFDGNGASQFFQALAELASGKSEPSVKPVWERERLNGSITEHPLQSPMDNILDAVSPYSSTTTLVHECFKVDIESIKRLKMSLSKKVSDYSLEGESFTSFEALGAYVWRSRTRALKLNYDGKTTLAIMVGLRKNPSFIPPVPEGYYGNAFVDPKVVLTVRELNEKPLSHVVKMIKEAKKLGFSKEYIRNVIDTLETNKKEPFYHQGIGASMVLTSWLHLGMENMDLGWAKVVNMIPAPCNTFGTAGMCVFSEPSDLDPSMNGGVRIFVSLPSDAMPKFKEEMEALKLVKP 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271994g00003 461 Gene3D - 7 218 IPR023213 -
Stsc271994g00003 461 Pfam Transferase family 17 455 - -
Stsc271994g00003 461 PANTHER ACYL TRANSFERASE 4 12 455 - -
Stsc271994g00003 461 Gene3D - 223 453 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271994g00003 Stsc-Chr271994 8221 9606 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271994g00003 9 451 Monolignol Biosynthesis Gene Families AT5G48930 26.652 1.74e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271994g00003 K20240 - gmx:100801843 499.975