Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271992g00001 ATGGAACCTTGCTTTGTATTTCCACTTAAATCAATCTTGTTCCTTATAATCACTACTCCATGGTTTCTATTCTCCATTGATGGCAATAATACTAATCGTGATGAGAGTTCAAGTTCTTCCACATACATAGTCCATATGGACAAATCTCAATTCCCTAACATATTTTCAACCCATCATGAATGGTTTCAAGCCACAATTCAATCCTCAAAATTATCTAAAACACCATCATCATCAAAAGAACAATTATTATTGTACTCATATAATCATGCAATGTATGGTTTCAGTGCAACCCTAACTCCCCAAGAATTGAACTCTCTTAGAAACTCTTATGGATTTGTTTCAGCATATCTAGATAGAACAGCCACAATGGACACCACACACACCTTTGAGTTTCTCAATTTAAACCCTAATTTTGGGCTATGGAATGCTTCAAATCTTGGTGAGGGGATGATTGTTGGTATGATTGATAGTGGGGTGTGGCCAGAGAGTGAGAGCTTCAAAGATGATGGAATGGAGAAGAGTTTGCCATTGAAATGGAAAGGGACATGTGAGGAAGGTGAAGGGTTCAATGCATCCATGTGCAACTTCAAGCTCATTGGTGCAAGGTATTTCAACAAGGGTTTAGTTGCTTCAAAACCTAATGTGACAATCAAGATGAACTCACCTAGGGATCATGATGGACATGGAAGTCACACTTCTTCCACTGTTGCTGGAAACTATGTTCATGGTGCCAATTTCTTTGGATATGCCAAAGGAGTGGCTAGAGGCATTGCACCAAGAGCTAGGCTTGCCATGTACAAGGTATCATGGGAGGAGGGCCGTCAAGCTTCGGATATCTTGGCCGGAATGGACCAAGCAATTGCCGACGGCGTTGACGTGATTTCAGCTTCCATGGGGCTTGATAAGGTTCCACTATATGAGGATTCAATAGCAATAGCTTCTTTTGCAGCAATGGAGAAAGGAATTGTTGTCTCAACTTCTGCAGGTAATGCAGGTCCAAATCTTGGAACCTTACACAATGGAATCCCTTGGGTTATAAATGTGGCTGCAAGCTCCGTTGATCGAACATTTGGAAGCTTGGTTCTTGGCAATGGTGAAACTATCATTGGTTGGACATTGTTTGCAGCAGATGCTATTGTTCAAGATCTTCAACTTGTTTATGATGATACTTTATCAGCTTGCAACTCTCTCCAGAGATTAAGTGAGGTTGCTGCTACCATATCTGGGATCATTGTATGTAAGGCCAGTGATTCAATTTCTGTGTTTGATCAAATCAAATTAGTCACTATGGCCAATAATGTAAAAGGAGCAGTGTTCATCTCTGATAATCCTGAACTCACTGAATGGGGCCATCTCTATTCTCCTAGCATTGTAATTACTCCCAAAGATGCAGAATCTGTGATCAATTATGCTCAAACCAACAAGAACCCTAAAGCCACCATCAATTTCCAGCAAACATTTCTTGGAATTGAGCCATCACCACTTGCTGCACATTACAGTTCAAGAGGGCCTTCACCTAGTTTTCCATGGATCCTAAAACCTGATATAATGGCACCAGGAACTAGGGTTTTAGCTGCTTATATTCCTCACAAGACAACTGCAACAATTGGCACAAATGTCTTCCTTCCAAGTGAATATAACTTTCAATCCGGAACTTCAATGGCTTGCCCTCATGTCTCCGCCGTGGCGGCGCTTCTTAAATCGGCACGCCCCGAATGGAGCGTTGCCGCTATTAAGTCGGCGATAATGACTACTGCTAATTTTCTCGACAACACGAAGAATCCGATTAGGGATAATGCTAAACCTAACCCTAACCCTAACCCTAATGGATTTGCTTCACCCCTTGCAATTGGATCTGGTGAGATTGATCCAAATAGAGCACTTGATCCAGGTTTGGTATATGATTCTACCCCACAAGATTATGTTAATCTCCTTTGTGGTATGAACTATAGTTCTGACCAAATACTAACAATTACTAGGTCAAGATCCTATAATTGTTCAAACCCATCACTTGATCTTAATTACCCTTCATTTATGGTCTTGTATAATAAATCAAGGGTTCACAAGTTTAGGAGGACAGTGACTAATGTTGGAGATGGTGGTGCTACATATAGTGTTAAAGTGAGTGAACCAATAGGGTCTAGTGTGGAAGTGTACCCTAGGACATTGGTATTCAAAGATAAGAATGAGAAGCAAAGCTATGAAGTTAACATAATGGTGCATATGAATGAAACTAATAATGTGTCATTTGGGGACATTGTTTGGGTTGAAGATGGTGGTGGAAAACATGCTGTTAGGAGCCCCATTGTAGTGGCACCATTTGGAATTGTGTGA 2334 0.4083 MEPCFVFPLKSILFLIITTPWFLFSIDGNNTNRDESSSSSTYIVHMDKSQFPNIFSTHHEWFQATIQSSKLSKTPSSSKEQLLLYSYNHAMYGFSATLTPQELNSLRNSYGFVSAYLDRTATMDTTHTFEFLNLNPNFGLWNASNLGEGMIVGMIDSGVWPESESFKDDGMEKSLPLKWKGTCEEGEGFNASMCNFKLIGARYFNKGLVASKPNVTIKMNSPRDHDGHGSHTSSTVAGNYVHGANFFGYAKGVARGIAPRARLAMYKVSWEEGRQASDILAGMDQAIADGVDVISASMGLDKVPLYEDSIAIASFAAMEKGIVVSTSAGNAGPNLGTLHNGIPWVINVAASSVDRTFGSLVLGNGETIIGWTLFAADAIVQDLQLVYDDTLSACNSLQRLSEVAATISGIIVCKASDSISVFDQIKLVTMANNVKGAVFISDNPELTEWGHLYSPSIVITPKDAESVINYAQTNKNPKATINFQQTFLGIEPSPLAAHYSSRGPSPSFPWILKPDIMAPGTRVLAAYIPHKTTATIGTNVFLPSEYNFQSGTSMACPHVSAVAALLKSARPEWSVAAIKSAIMTTANFLDNTKNPIRDNAKPNPNPNPNGFASPLAIGSGEIDPNRALDPGLVYDSTPQDYVNLLCGMNYSSDQILTITRSRSYNCSNPSLDLNYPSFMVLYNKSRVHKFRRTVTNVGDGGATYSVKVSEPIGSSVEVYPRTLVFKDKNEKQSYEVNIMVHMNETNNVSFGDIVWVEDGGGKHAVRSPIVVAPFGIV 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271992g00001 777 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 123 IPR037045 -
Stsc271992g00001 777 Pfam Peptidase inhibitor I9 41 120 IPR010259 -
Stsc271992g00001 777 CDD Peptidases_S8_3 122 587 IPR034197 -
Stsc271992g00001 777 Gene3D - 645 773 - -
Stsc271992g00001 777 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 42 771 IPR045051 -
Stsc271992g00001 777 Gene3D Peptidase S8/S53 domain 149 641 IPR036852 GO:0004252|GO:0006508
Stsc271992g00001 777 Pfam Fibronectin type-III domain 672 771 IPR041469 -
Stsc271992g00001 777 CDD PA_subtilisin_like 359 481 - -
Stsc271992g00001 777 ProSitePatterns Serine proteases, subtilase family, serine active site. 551 561 IPR023828 -
Stsc271992g00001 777 ProSiteProfiles Serine proteases, subtilase domain profile. 128 628 - -
Stsc271992g00001 777 FunFam Subtilisin-like protease SBT1.5 149 362 - -
Stsc271992g00001 777 MobiDBLite consensus disorder prediction 593 616 - -
Stsc271992g00001 777 PRINTS Subtilisin serine protease family (S8) signature 224 237 IPR015500 -
Stsc271992g00001 777 PRINTS Subtilisin serine protease family (S8) signature 550 566 IPR015500 -
Stsc271992g00001 777 PRINTS Subtilisin serine protease family (S8) signature 147 166 IPR015500 -
Stsc271992g00001 777 SUPERFAMILY Subtilisin-like 124 632 IPR036852 GO:0004252|GO:0006508
Stsc271992g00001 777 Gene3D - 354 488 - -
Stsc271992g00001 777 Pfam Subtilase family 147 592 IPR000209 GO:0006508|GO:0008236
Stsc271992g00001 777 MobiDBLite consensus disorder prediction 593 612 - -
Stsc271992g00001 777 FunFam Subtilisin-like protease SBT1.9 30 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271992g00001 Stsc-Chr271992 1939 5825 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271992g00001 35 769 Subtilisin-like Serine Gene Family AT2G05920 40.819 8.44e-179 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271992g00001 - - gmx:100806072 1032.32