Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271991g00010 ATGGCAAAGAGCTATCTGAAGAACAACAGACTTTATGTTCCCATCGGTTTCGCACAGGAATTAAGGCTGTTTGGAACAAGATCCATCTGGAATGTTATAGGACCATCAACCATAGATAATAGAATCTTCACATTTGTTGCAACGAACAATGAGGAACGCAATCCACTAGAGTTCTACATTGGCAAGGATTGGCAGCGGTTCCGTACTGCTTATCATTTAACCACCAGAGACTCTGTGGTTTTCCATATCGTGAATCCCGTTAGACGTATCATGCGCATCCGCATCATAAGAAACGTTTAG 300 0.4233 MAKSYLKNNRLYVPIGFAQELRLFGTRSIWNVIGPSTIDNRIFTFVATNNEERNPLEFYIGKDWQRFRTAYHLTTRDSVVFHIVNPVRRIMRIRIIRNV 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271991g00010 99 SUPERFAMILY DNA-binding pseudobarrel domain 1 96 IPR015300 -
Stsc271991g00010 99 Gene3D - 1 99 IPR015300 -
Stsc271991g00010 99 Pfam B3 DNA binding domain 2 98 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271991g00010 Stsc-Chr271991 70359 70773 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Stsc271991g00010 B3 6.5e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271991g00010 - K14684 nara:QQ977_17205 36.965