Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271984g00002 ATGGAGTCGAAGGTGGTGTTTGACGGAGAAGCGGCGTCGATGCTGGTGAAGGAGCTGAGAGGGAGCTTCGGTTCTGGAAAGACGAGAAGCTACGAGTGGAGAGTGTCGCAGGTGAAGGCACTGCTGAAGATGGTTACTGATAACGAGAAACAGATCGTCGACGCTCTTCTCTCCGATCTCGCCAAGCCACCGCTCGAAACCGTCGTCTACGAGATTGGAATGTTTAAGAACTCATGTGAAGTCATATTGAAGGAATTGAAACAATGGATGAAGCCAGTGAAGGTCAAATCTTCACTATCAACTTTTCCTTCTTCAGCTGAAATAGTACCTGAACCACTTGGGGTTGTGCTAGTCATTTCTGCATGGAACTATCCAATTTTGTTGTCTCTTGATCCAGTTGTTGGAGCCATTGCAGCTGGTAATGCTGTGGTTCTAAAACCATCAGAGATTGCTCCAGCTTCTTCATCACTGCTGGCTAAACTGTTACAAGAGTACATGGATAACTCATGTGTTAGAGTTGTTGAAGGAGCAGTTGATGAAACAACTGCACTCTTGGATCAAAAGTGGGACAAGATTTTCTACACAGGTAATGGAAGAGTGGGACGCTTAATCATGACTGCTGCTGCAAAACACCTTACACCTGTTGTTCTGGAGCTTGGAGGAAAATGTCCAGCAGTTGTTGATTCAGATGTCAATTTACAGGTAGCAGCTAGACGCTTAATTTCAGGCAAGTGGGGACTCAACAATGGGCAAGCCTGTGTTTCTCCAGATTATGTTATCACAACAAAAGACTTTGCTCCTAAGTTGGTGGATACTCTGAAGACTGAGCTGGAGAATTTTTTTGGAAAGAATCCGTTGGAATCAAAAGATATTTCCAGAATTGTGAGTCACAACCACTTTGCTCGCTTAGCGAAGCTCTTGGATGGCGAGAAGGTTTCCGGCAAGATTGTCCATGGAGGCGAAAAAGATGAAAGCAAATTGAGGATTGCTCCCACTTTACTATTGGATGTTCCACATGATTCTCTGATCATGAGTGAGGAGATATTTGGTCCATTGCTTCCCATCATCACGGTGAATAAATTGGAAGAAAGTTTTGATTTCATCAATTCAAGACCAAAGCCTCTGGCTGCATATATATTTACAAACAACAAGAAGCTGAAGGAGCATTTTGTGATGAATGTTTCTGCAGGAGGCATGCTTATCAATGACATTGCCTTACATCTTGTTGTTCCCTCATTGCCATTTGGGGGTGTAGGAGACAGTGGAACGGGTTCATACCATGGAAGGTTCTCCTTTGAAGCTTTTACTCACAAGAAAGCAGTTCTTTCTCGTGGTTTTGGTGGAGACGCATCACTAAGGTATCCACCATACACAGAAACAAAATTGAGGGTTATGAAGGCACTCATTGGTGGTAGCATTCTTAACATAGTTCGTGCTCTTTTGGGATGGTCCTCCTAG 1458 0.439 MESKVVFDGEAASMLVKELRGSFGSGKTRSYEWRVSQVKALLKMVTDNEKQIVDALLSDLAKPPLETVVYEIGMFKNSCEVILKELKQWMKPVKVKSSLSTFPSSAEIVPEPLGVVLVISAWNYPILLSLDPVVGAIAAGNAVVLKPSEIAPASSSLLAKLLQEYMDNSCVRVVEGAVDETTALLDQKWDKIFYTGNGRVGRLIMTAAAKHLTPVVLELGGKCPAVVDSDVNLQVAARRLISGKWGLNNGQACVSPDYVITTKDFAPKLVDTLKTELENFFGKNPLESKDISRIVSHNHFARLAKLLDGEKVSGKIVHGGEKDESKLRIAPTLLLDVPHDSLIMSEEIFGPLLPIITVNKLEESFDFINSRPKPLAAYIFTNNKKLKEHFVMNVSAGGMLINDIALHLVVPSLPFGGVGDSGTGSYHGRFSFEAFTHKKAVLSRGFGGDASLRYPPYTETKLRVMKALIGGSILNIVRALLGWSS 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271984g00002 485 PANTHER ALDEHYDE DEHYDROGENASE 11 476 IPR012394 GO:0006081
Stsc271984g00002 485 PIRSF ALDH 2 479 IPR012394 GO:0006081
Stsc271984g00002 485 FunFam Aldehyde dehydrogenase 20 224 - -
Stsc271984g00002 485 Pfam Aldehyde dehydrogenase family 28 441 IPR015590 GO:0016491
Stsc271984g00002 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 221 421 IPR016163 GO:0016620
Stsc271984g00002 485 FunFam Aldehyde dehydrogenase 221 421 - -
Stsc271984g00002 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 21 439 IPR016162 GO:0016491
Stsc271984g00002 485 SUPERFAMILY ALDH-like 15 446 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271984g00002 Stsc-Chr271984 22407 27246 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271984g00002 7 484 Aldehyde Dehydrogenase Gene Family AT4G34240 65.272 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271984g00002 K00128 - gmx:100783726 791.956